Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo3g03660 | ATGAGAGGACCAGTGATGGTGAGTAGTGTGAAGGGAAGAAGAGGAAGCCGAGACGGCAGCGAAGAAGTGTCCCCGGCGGCGTTAATGTTAGCTGCTTTGAAGAAATCAATGGTGGCTTGTAGTGTGGAGAGTCCTGACGATGTAATCTCCGCCGTTCATCATCCAATGGAGATTGGATGGCCTACAAATGTTAAGCATGTTAGCCATGTCACGTTTGATCGTTTTAATGGGTTTTTGGGTCTTCCTCTTGAGCTTGAGGTTCATGTTCCTGCTCCTGTTCCTAGTGCTAGTGTTAGTGTGTTTGGTGTCTCAGCAGAATCAATGCAATGTTCTTATGATTCAAAAGGAAACAGTGTCCCCACTATTCTGTTACTGATGCAGGAGAGGTTATACTCACAGGGAGGACTAAAGGCTGAAGGAATATTTCGTATAAATCCAGAAAACGGCGAAGAGGAACATTTGAGGGAGCAGTTGAATAGTGGCATTGTGCCAAATGACATTGATGTTCATTGCTTGGCTGGCTTAATTAAAGCATGGTTTAGGGAACTTCCTTCAGGAGTGTTAGATGGACTTTCACCTGAGGAAGTTCTTGAATGCAACACTGAAGAAGAATCTGTTGAGCTTGTGAAGCAGCTGAAACCAGTTGAATCAGCTTTGCTTAATTGGGCTGTTGATCTTATGGCTGATGTTGTAGTTGAAGAGGAGTATAACAAAATGGATGCTAGAAATATTGCTATGGTTTTTGCTCCAAATATGACTCAGATGTCTGATCCACTAACTGCTCTAATGCATGCGGTCCAAGTGATGAATTTACTGAAAACACTGATATTGAAGACACTTCGAGACCGCGAAGAAACAGCAACAGCAGAATATTCATCAATGTCATCTCATTCATCAGATGAATATGACAGTCAACAAGAAATGTACACTAGCGGTGAATTGAAAAGAACCAAGTTAGATTATGATGATCATGTTGACTACAGCCACAACATTGAAGAAGCTGCATCCGCTCTCAGTGAGATAGAAGAATGCTTCTTAGAACAATTGGATGGTGTTCAGACAAAACGATTGCAAGAAGAGTTAGAGAGCCCTACCAAAACTGAGGATTCCTGTCTGAGTTCCAGTTATAGAAACGGCTCGACAACAACTGAGGGATCAAATGCTGACACAAGTAGTCCATCAATAGAAAGTAAAGACACCAATGATGTGCAGATGGTAGATAAATTTAGTGATTCTATTTCACTCTTGCCTTTGTTTGCATCTAATTAA | 1269 | 0.4169 | MRGPVMVSSVKGRRGSRDGSEEVSPAALMLAALKKSMVACSVESPDDVISAVHHPMEIGWPTNVKHVSHVTFDRFNGFLGLPLELEVHVPAPVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKAEGIFRINPENGEEEHLREQLNSGIVPNDIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLECNTEEESVELVKQLKPVESALLNWAVDLMADVVVEEEYNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLRDREETATAEYSSMSSHSSDEYDSQQEMYTSGELKRTKLDYDDHVDYSHNIEEAASALSEIEECFLEQLDGVQTKRLQEELESPTKTEDSCLSSSYRNGSTTTEGSNADTSSPSIESKDTNDVQMVDKFSDSISLLPLFASN | 422 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo3g03660 | 422 | PANTHER | MKIAA1688 PROTEIN | 17 | 374 | IPR044785 | GO:0005096 | |
| Mepo3g03660 | 422 | CDD | CRIB | 56 | 86 | - | - | |
| Mepo3g03660 | 422 | MobiDBLite | consensus disorder prediction | 289 | 307 | - | - | |
| Mepo3g03660 | 422 | MobiDBLite | consensus disorder prediction | 358 | 403 | - | - | |
| Mepo3g03660 | 422 | SUPERFAMILY | GTPase activation domain, GAP | 99 | 277 | IPR008936 | - | |
| Mepo3g03660 | 422 | ProSiteProfiles | Rho GTPase-activating proteins domain profile. | 103 | 284 | IPR000198 | GO:0007165 | |
| Mepo3g03660 | 422 | MobiDBLite | consensus disorder prediction | 367 | 400 | - | - | |
| Mepo3g03660 | 422 | Gene3D | CRIB domain | 53 | 89 | IPR036936 | - | |
| Mepo3g03660 | 422 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Mepo3g03660 | 422 | ProSiteProfiles | CRIB domain profile. | 58 | 71 | IPR000095 | - | |
| Mepo3g03660 | 422 | SMART | PBD_5 | 58 | 92 | IPR000095 | - | |
| Mepo3g03660 | 422 | Gene3D | Rho GTPase activation protein | 90 | 282 | IPR008936 | - | |
| Mepo3g03660 | 422 | FunFam | Rho GTPase-activating protein 5 | 88 | 281 | - | - | |
| Mepo3g03660 | 422 | Pfam | P21-Rho-binding domain | 57 | 85 | IPR000095 | - | |
| Mepo3g03660 | 422 | MobiDBLite | consensus disorder prediction | 288 | 307 | - | - | |
| Mepo3g03660 | 422 | Pfam | RhoGAP domain | 120 | 254 | IPR000198 | GO:0007165 | |
| Mepo3g03660 | 422 | CDD | RhoGAP | 120 | 270 | - | - | |
| Mepo3g03660 | 422 | SMART | RhoGAP_3 | 117 | 280 | IPR000198 | GO:0007165 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo3g03660 | Mepo-Chr3 | 46320283 | 46323461 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo3g03660 | - | K20642 | gmx:100812700 | 602.438 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mepo3g03660 | 3 | 46320283 | 46323461 | Mepo3g03660 | 3 | 46320283 | 46323461 | ECH | |
| Mepo3g03660 | 3 | 46320283 | 46323461 | Mepo4g03722 | 4 | 46665731 | 46668764 | PCT |