Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03631 ATGAAATTCGGATACACATTCAAAGAGTACCTGCAGGTGGAGCGGGAGTGGCTGTTGGATGAGAATTGTGCACATATTGAATATAACAGGTTGAAAAATGTTTTGAAGAGTTGTCAGAATTGCAAAGACAATAATAATACCTCTTCTCATGATAAAGACCAGTTATGTCACTGTCAATCTTGCCCAGTGTGCGACCAGAAGTTCTTTTCCGAGTTGATGAAAGAAGCATCAGATATAGCAGGATACTTTAGTTCAAAAGTTCAACATCTCCTTCATCTTCACATTGCAAAAGGACTACAGAGATATGTATTGCGTATGCGCCAGTGTTTTAAAAATGACAGGGAAGCCCTTGCTCAAGAAGGGAGAATTCTAATTGAGTACATTACCATGAATGCAATTGCGATGAGGAAAATACTTAAGAAATATGATAAAGTACACAGTTCTGTGAATGGGGAGAATTTCAAATCTAAGATGCAGTCTGAGCATATTGAACTTTTACACTCACCTTGGCTGGTTGAATTGGGTGCTTTTTACCTGAATTCGAGTGGACAAGATGGTTGCGAGCTTGATGGAGTCCGTGGTCACTTTTCATGTGATTTAAATGTAACGGATGCTGTAATGACATTGATTCTTCCAGATTCTATTAAGCTTGAATATGATCTAAATTGTGCAATTTGCCTGGATTTTGTTTTCAATCCATATGCATTGAGTTGTGGCCACTTCTTCTGCAAATCATGTGCTTGCTCTGCTGCATCTGTGATGACTTTCCAGGGCCTTAAAGCTGCAAGCCCAGAGTCAAAGTGTCCTATATGCAGAGAGGTCGGAGTTTATTCCAAGGCAGTCCGAATGTTAGAGCTCGATCTGCTTATGAAAAGAAGGTGCAAAGATTATTGGAAAGAAAGGCTAGCCAGGGAAAGAGTTGATCAATTGAAGCAGTCAAGGGAATTTTGGAATATGCAATCCACATATACAGTGGGATTGCTGTAG 987 0.3982 MKFGYTFKEYLQVEREWLLDENCAHIEYNRLKNVLKSCQNCKDNNNTSSHDKDQLCHCQSCPVCDQKFFSELMKEASDIAGYFSSKVQHLLHLHIAKGLQRYVLRMRQCFKNDREALAQEGRILIEYITMNAIAMRKILKKYDKVHSSVNGENFKSKMQSEHIELLHSPWLVELGAFYLNSSGQDGCELDGVRGHFSCDLNVTDAVMTLILPDSIKLEYDLNCAICLDFVFNPYALSCGHFFCKSCACSAASVMTFQGLKAASPESKCPICREVGVYSKAVRMLELDLLMKRRCKDYWKERLARERVDQLKQSREFWNMQSTYTVGLL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03631 328 ProSiteProfiles SPX domain profile. 1 156 IPR004331 -
Mepo3g03631 328 SUPERFAMILY RING/U-box 215 274 - -
Mepo3g03631 328 CDD RING-HC_BAH1-like 213 286 - -
Mepo3g03631 328 ProSitePatterns Zinc finger RING-type signature. 238 247 IPR017907 -
Mepo3g03631 328 Pfam RING-type zinc-finger 223 269 IPR027370 -
Mepo3g03631 328 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 209 324 IPR013083 -
Mepo3g03631 328 ProSiteProfiles Zinc finger RING-type profile. 223 272 IPR001841 -
Mepo3g03631 328 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 326 IPR033326 -
Mepo3g03631 328 SMART ring_2 223 271 IPR001841 -
Mepo3g03631 328 CDD SPX_BAH1-like 2 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03631 Mepo-Chr3 46047212 46051818 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03631 K16275 - gmx:100781704 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03631 3 46047212 46051818 Mepo3g03631 3 46047212 46051818 ECH