Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03613 ATGGATTTCTATGGTGTCTCCAATTTCATTACCCTCTTCCTCCTTATCCTCATTCCCTTCCATTCCTCATTACCCACCACCACCACTCAAATCAACTCCAACTCCATCCTCGTCGCACTTCTCGATTCCCACTACACCGAACTGTCCGAGCTCGTTGAAAAGGCACTTCTCCTTCAAAAACTCGAAGAAGCCGTCGGTAACCACAACATCACCATCTTCGCACCCAGGAATCAAGCTCTCGAACGTGACCTTGACCCTGAATTCAAAAGATTCCTCTTAGAACCTCGTAATCTCAGGTCACTCCAAACTCTTTTAATGTCTCACATTCTTCCTTCAAGAATCGCTTCACATCATTGGCCACCCACTCACCTCCACCACCACACTCTCTCCAACCACCGTCTTCACCTCACCACAAACCCCACCGGCGCAAAAACCGTTGATTCCGCTCAGATCCTTAAACCAGATGACGTTATCCGTCCAGACGGCGTCATCCACGGCATCGAACGCTTGATAATCCCTCGTTCCGTACAAGAAGATTTCAACCGGAGAAGAAACCTCCGTGACATCTCCGCAATTCTTCCAGAAGGAGCACCGGAGGTAGATCCACGTACAAACCGCTTAAAGAAACCCGCACCAGTCCCCGCCGGAGCTCCACCGGTTTTACCAATCTACGACGCATTAGCACCAGGACCATCACTAGCTCCAGCACCAGCACCAGGTCCAGGTGGTCCACGTCATCATTTCAACGGCGAACGTCAAGTAAAGGATTTCATCCAAACTCTTCTCCATTACGGTGGTTACAACGAAATGGCAGATATTCTCGTTAACCTAACGTCGTTAGCAACGGAAATGGGTCGTTTAGTTTCTGAAGGATATGTTTTAACAGTTTTGGCACCAAATGATGAAGCAATGGCGAAATTAACCACTGATCAATTATCGGAACCAGGTGCACCGGAACAGATTATATATTATCATATAATTCCTGAGTATCAAACGGAGGAGAGTATGTATAACGCCGTTAGAAGATTCGGGAAAATTAGTTATGATACGTTGCGTTTGCCTCATAAGGTTGTTGCTCAGGAATCTGACGGTTCTGTTAAATTTGGTCACGGTGATTCTTCTGCTTATTTGTTTGATCCTGATATTTACACCGACGGTAGAATTTCTGTTCAAGGTATTGACGGTGTTCTTTTGCCACCGGAGGAAGAGAATGAAGATGAATCATCAGCACCTATTCGCCGTGTTAAAACTCCACTGGTTAAAGTTGCTTCTAAACCAAGGAGAGGGAAATTGCTTCAACTTGCTTGTAGCATGGTTGGATCCTTTGGAAGAGTCTGCTCATGA 1344 0.4621 MDFYGVSNFITLFLLILIPFHSSLPTTTTQINSNSILVALLDSHYTELSELVEKALLLQKLEEAVGNHNITIFAPRNQALERDLDPEFKRFLLEPRNLRSLQTLLMSHILPSRIASHHWPPTHLHHHTLSNHRLHLTTNPTGAKTVDSAQILKPDDVIRPDGVIHGIERLIIPRSVQEDFNRRRNLRDISAILPEGAPEVDPRTNRLKKPAPVPAGAPPVLPIYDALAPGPSLAPAPAPGPGGPRHHFNGERQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEESMYNAVRRFGKISYDTLRLPHKVVAQESDGSVKFGHGDSSAYLFDPDIYTDGRISVQGIDGVLLPPEEENEDESSAPIRRVKTPLVKVASKPRRGKLLQLACSMVGSFGRVCS 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03613 447 SUPERFAMILY FAS1 domain 233 401 IPR036378 -
Mepo3g03613 447 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 21 446 IPR044654 -
Mepo3g03613 447 SUPERFAMILY FAS1 domain 34 174 IPR036378 -
Mepo3g03613 447 Gene3D FAS1 domain 273 400 IPR036378 -
Mepo3g03613 447 Pfam Fasciclin domain 279 399 IPR000782 -
Mepo3g03613 447 Pfam Fasciclin domain 44 173 IPR000782 -
Mepo3g03613 447 Gene3D FAS1 domain 36 173 IPR036378 -
Mepo3g03613 447 ProSiteProfiles FAS1/BIgH3 domain profile. 32 171 IPR000782 -
Mepo3g03613 447 SMART fasc_3 71 174 IPR000782 -
Mepo3g03613 447 SMART fasc_3 295 400 IPR000782 -
Mepo3g03613 447 ProSiteProfiles FAS1/BIgH3 domain profile. 254 397 IPR000782 -
Mepo3g03613 447 FunFam Fasciclin-like arabinogalactan protein 16 249 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03613 Mepo-Chr3 45888614 45891573 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03613 - - gmx:100800956 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03613 3 45888614 45891573 Mepo3g03613 3 45888614 45891573 ECH