Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03602 ATGACCCGATTGACGGAGAAGCTCCGTTTGTCGTTCTACATACCGACCCGTTTTCTCTCTCTTCTTTCTCTCTCCTCTACTCTCCATCTCTGCAAGTCCATTGCTCGTTTTCTACACTCCCAAACCCTACTACCTTTCTTCTCCATGGACAACAATCTCTTCTCCGATAACGTCGATTACTTCTCCGATGACCTAGATTCATCCTCTTACTCCCTCCGCCTTAACCGTCGCTTACCCGACTCCGATCACCTCGATTTCGCACTCGATAGGGTTTACCTTCTCCCCTACAGGTGGTGGATTGATGCAGAAGGTGAAGGTGATCGTGTGGAAGGTGTTTTGTATACAGTTTTTTCGAATGATGATTCCGAGTCTGAAATTTTGCTTCATCTGAAGAAGGAAGAGGATTCTGAGAAGATTAAGAGTTTGGAGGCAGGGTTTTCGGGGCGGCATTATGCTTTGGTTCCTGAAGGAGTTTGGTTGCGTGCTCTCAAACGGTATAATGATTTTAATAATGCAGCGAAAGATTTTGGGAGACTCTTCTATGCAGAGGATTGTTTGCCAGATTTGTTCCCTTTGCAACTTAGGATATTTGTTTCATGGGAAACCAGTTCACTGGTAGCAAAGATAAGCGAAAAGGAAAATGTGCCTGACTTCTACAAGAAAGCTTGTGATATTTTCAATTCTGCATATGACTCATTGTATATTTGGGACTTCTCTGGGCAGACTGCCCAGCTTTTACTAAATGACAAAGCTAGGGTGCCAAATGATTCTTCCGGTCAACCTGGAAAAGAGGTTCATCTGGAGTTACAAGTTCATGGACTTGCAGATTCAATGAAGGGTAGTCAGAGCAATGGGATGATTGCAGATAGGTCTCAGATGGAATGTTCTTCTAACGGAGACCCTGTTATGATGAATGGATGCACTGGCGATGTTATCCCCTATGTAACAGCAAACTATTTTCAAGGCAGTAGCTATAGAGCAGTTCGATCTTTAGGCTTGACAGGATTACATAATCTTGGAAATACCTGTTTTATGAATAGTGCCATTCAGTGTTTGGCTCACACCCCAAAACTTGTTGATTTTTTCCTTGGAGATTATCGTAGGGAGATAAATTATGAAAATCCCTTGGGAATGAATGGAGAACTTGCTTTATCTTTTGGAGATTTACTTAGACAGCTGTGGGTTCCTGGAGCATCACCTTTGGCACCAAAAGTGTTCAAGATGAAACTGGCTAACTTTGCTCCTCAGTTCAGTGGTTATATGCAGCACGATTCTCAAGAACTGCTTGCTTTTTTGTTGGATGGACTACATGAAGACCTTAATCGTGTAAAACGCAAGCCATATCATGAAGTTAAGGATGCAGATGGTCGTCCAGATGGAGAAGTGGCAGAAGAGTATTGGCGAAATCACCTTGCTCGCAATAACTCAATAGTAGTTGATTCGTTCCAAGGTCAGTTCCGGTCGACATTGATTTGCCCTTTTTGCAAGAGGGTTTCTATCACCTTTGACCCTTTTATGTACCTATCTCTGCCATTGCCTTCTACAACGACACGGACAATGACTGTAACTGTCATGAGCACTGATGGGGTCACATTGCCTTCTGCAATTACCGTAACAGTGCCGAAAAGTGGAACACTTAAGGATCTAATTGGGGCCTTAGCTGCTTCTTGTTCTCTGAGCGATGATGAAACCCTCTTGGTGGCTGAGATTTACAATAATAAGATTGTTCGGGGATTGGAGGACAAACTTTTCATGTTCCCATCCGACCCATTAGCTGATATCAGAGATCTAGACAAACTTGCCGCTTACCGAGTGCAGAAGGATACTGAAGATAACCCAGTGGTTGTTTTCATGCATGAACTTGTGGTGGAAATTTACAAGGGGAGGTTTGAAAGTAGAATCATTGGTTTTCCACTTGTAGCAAGGTTGTCCGGTATTTCTTGCACAGATGATCTTCGTAGGGTGTTTCTAAATTTAATGAATCCATTTCTGATGCAAAACTCTGAAGAAACAATAGATGAATATGACAAGGATGAGGATGTTGATGGTGGTGATACTAAAAAACTAAATGAAGTTGATGAATTAGGCGAAACTGATAACTCTGAAGCAATAGAAAGTGATGCAGTGTCGAATAGCGGTGCAGAGGATGACATACATTTGTGGACCGACTTTGAATTTTATTTATTACATCCTGGGAGAGGTGAGACTTATAAGATAACATCGAAAGAACCATTACCTGCTGCAATGTTGTCCGGAAATCTGGAGGTAGCTGTCGTATGGTCAGATAAGATGCTTAAAAAGTACGACATGAACCTGCTTGATTCATTGCCTCAGGTTTTCAGGCCCCAATTATTCACCAAGAGAACACAAGAATCAATATCTATTTACAAGTGCCTTGAAGCCTTCTTGAGAGAGGAACCTCTTGGGCCAGAAGACATGTGGTACTGTCCTACCTGCAAAAAACATCAGCAAGCAACTAAAAAGTTGGACCTTTGGAGATTGCCTGAAATTCTTGTTGTTCATTTGAAGAGGTTCTCATACAACAGATTTTTCAAGAATAAGCTGGACACTTTCGTTGACTTCCCAACTAATGATCTGGATTTGTCAACCTATGTCGCTCACGAGATTTGTCCATCTCCCAACTGTTATATGTTATATGCAATTATTTGTCACTACGGGGGGTTAGGAGGAGGTCACTATACAGCGTTTGTCCGTTATGGCCATGATAAATGGTATGAGTTTGATGATAGCAGGGTAGCGCCTGCTGATGAGGAGACAATTAAGACTCCTGCTGCTTATGTTCTTTTCTACAAGAAAGTTTAG 2823 0.4215 MTRLTEKLRLSFYIPTRFLSLLSLSSTLHLCKSIARFLHSQTLLPFFSMDNNLFSDNVDYFSDDLDSSSYSLRLNRRLPDSDHLDFALDRVYLLPYRWWIDAEGEGDRVEGVLYTVFSNDDSESEILLHLKKEEDSEKIKSLEAGFSGRHYALVPEGVWLRALKRYNDFNNAAKDFGRLFYAEDCLPDLFPLQLRIFVSWETSSLVAKISEKENVPDFYKKACDIFNSAYDSLYIWDFSGQTAQLLLNDKARVPNDSSGQPGKEVHLELQVHGLADSMKGSQSNGMIADRSQMECSSNGDPVMMNGCTGDVIPYVTANYFQGSSYRAVRSLGLTGLHNLGNTCFMNSAIQCLAHTPKLVDFFLGDYRREINYENPLGMNGELALSFGDLLRQLWVPGASPLAPKVFKMKLANFAPQFSGYMQHDSQELLAFLLDGLHEDLNRVKRKPYHEVKDADGRPDGEVAEEYWRNHLARNNSIVVDSFQGQFRSTLICPFCKRVSITFDPFMYLSLPLPSTTTRTMTVTVMSTDGVTLPSAITVTVPKSGTLKDLIGALAASCSLSDDETLLVAEIYNNKIVRGLEDKLFMFPSDPLADIRDLDKLAAYRVQKDTEDNPVVVFMHELVVEIYKGRFESRIIGFPLVARLSGISCTDDLRRVFLNLMNPFLMQNSEETIDEYDKDEDVDGGDTKKLNEVDELGETDNSEAIESDAVSNSGAEDDIHLWTDFEFYLLHPGRGETYKITSKEPLPAAMLSGNLEVAVVWSDKMLKKYDMNLLDSLPQVFRPQLFTKRTQESISIYKCLEAFLREEPLGPEDMWYCPTCKKHQQATKKLDLWRLPEILVVHLKRFSYNRFFKNKLDTFVDFPTNDLDLSTYVAHEICPSPNCYMLYAIICHYGGLGGGHYTAFVRYGHDKWYEFDDSRVAPADEETIKTPAAYVLFYKKV 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03602 940 CDD Peptidase_C19R 793 938 - -
Mepo3g03602 940 Gene3D Cysteine proteinases 321 564 - -
Mepo3g03602 940 Pfam Ubiquitin carboxyl-terminal hydrolase 334 937 IPR001394 GO:0004843|GO:0016579
Mepo3g03602 940 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 335 350 IPR018200 GO:0004843|GO:0006511
Mepo3g03602 940 SUPERFAMILY Cysteine proteinases 332 939 IPR038765 -
Mepo3g03602 940 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 883 900 IPR018200 GO:0004843|GO:0006511
Mepo3g03602 940 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 281 939 - -
Mepo3g03602 940 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 334 940 IPR028889 -
Mepo3g03602 940 Gene3D Cysteine proteinases 732 940 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03602 Mepo-Chr3 45804697 45813803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03602 794 940 Miscellaneous Gene Families AT4G31670 33.333 7.23e-18 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03602 - K21343 mtr:25499505 1736.47