Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03565 ATGGCTTATCCTAACATTCTCTTTATCCTTTCTCTTCTCTTTCCCCTCCTCACATTTTCTTCTTCAAATACCATTACCCTCCCTCTTTCCCCTCTATTCACCAAATCCCCATCCTCAAATCTCTTCAACTCTCTCAAAACCGCTGCTACATCTTCTCTAACAAGAGCACACCACCTCAAAACCCCTAAATCAAATCACAACAAAACCAAATCCTCTTCCTCCACCAACACACAAATTTTCTCCAAAAGCTATGGTGGCTATTCAATAAATCTCAATTTTGGAACACCACCACAAACCTTATCATTTGTCCTAGACACTGGTAGCAGCCTTGTTTGGTCTCCATGTACCTCTCACTACCTATGTTCCAATTGCAACTTCCCAAACATCAACCCAACAAAAATCGCAGCTTTCATCCCAAGAAACTCATCAACCAACAAAATCCTAGGCTGCACAAACCCCAAATGCGGTTATGTTTTCGGACCCGACATCGAATCTCGTTGCCGAGGTTGCAATCCAAATACACGAAACTGCAACAACATCACCTGCCCTTCTTATTTAGTTCAATACGGTTTAGGTTTAACCGCTGGTGTCTTACTATTAGATAACCTCAATTTTCCTAGCAAAACCGTAGCAAATTTTCTCGTAGGTTGTTCCTTTGTATCTGACAGACAACCCTCTGGCATAGCTGGATTCGGTCGTGGAGAAGATTCTCTTCCATCGCAAATGGGTCTTAAAAGATTCTCTTATTGCTTACTTTCTCATCAATTCGACGACTCGCCGGAAAGTAGTAACCTCGTTTTGCAAGTTTCTTCCACCGGCGATACAAAAACACGTGGTTTAAGCTACACTCCGTTTCGAAAAAACCCATCAACGAACAACACTGCATTTCTTGAATACTATTACGTGAATCTACGAAGTGTCATCATCGGAGGAAAACGTGTTAAGATTCCGGAAATTGGAACCGACGGTAATGGTGGCACTATCGTTGATTCTGGATCAACGTTCACATTCATGGAACGTGAAATCTACGATTTGGTGGCAAAGGAGTTTGAAAAACAGCTTTCGAATTTCACTAGAGCGAAAGACGTTGAAGGTGAATCAGGGTTGAGTCTCTGTTACGACTTCACCGGAGTAAAAACAGTGCCGTTTCCGGAGTTGGTGTTTCAGTTTAAGGGGGGTGCAAAAATGAAGTTACCTGTTGAGAATTATTTTTCTTTAGTTGGTGATGGTGAGGTTGCTTGTTTGACTGTTATAACTGACGGAGTTTCGGCGCCGGAGAGAAGTGGTGGTCCGGCGATTATTTTGGGGAATTATCAGCAGCAGAATTTTAACGTTGAGTATGATTTGGAAAATGATAGATTTGGATTTGGACCTCAAAGATGTGAAAAAAGTGCTTAA 1398 0.4192 MAYPNILFILSLLFPLLTFSSSNTITLPLSPLFTKSPSSNLFNSLKTAATSSLTRAHHLKTPKSNHNKTKSSSSTNTQIFSKSYGGYSINLNFGTPPQTLSFVLDTGSSLVWSPCTSHYLCSNCNFPNINPTKIAAFIPRNSSTNKILGCTNPKCGYVFGPDIESRCRGCNPNTRNCNNITCPSYLVQYGLGLTAGVLLLDNLNFPSKTVANFLVGCSFVSDRQPSGIAGFGRGEDSLPSQMGLKRFSYCLLSHQFDDSPESSNLVLQVSSTGDTKTRGLSYTPFRKNPSTNNTAFLEYYYVNLRSVIIGGKRVKIPEIGTDGNGGTIVDSGSTFTFMEREIYDLVAKEFEKQLSNFTRAKDVEGESGLSLCYDFTGVKTVPFPELVFQFKGGAKMKLPVENYFSLVGDGEVACLTVITDGVSAPERSGGPAIILGNYQQQNFNVEYDLENDRFGFGPQRCEKSA 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03565 465 FunFam Aspartyl protease family protein 271 464 - -
Mepo3g03565 465 Gene3D Acid Proteases 272 463 IPR021109 -
Mepo3g03565 465 SUPERFAMILY Acid proteases 83 461 IPR021109 -
Mepo3g03565 465 Pfam Xylanase inhibitor N-terminal 87 265 IPR032861 -
Mepo3g03565 465 PANTHER OS07G0603500 PROTEIN-RELATED 36 462 - -
Mepo3g03565 465 ProSiteProfiles Peptidase family A1 domain profile. 87 457 IPR033121 -
Mepo3g03565 465 Gene3D Acid Proteases 70 266 IPR021109 -
Mepo3g03565 465 Pfam Xylanase inhibitor C-terminal 300 457 IPR032799 -
Mepo3g03565 465 CDD pepsin_A_like_plant 86 461 IPR034161 -
Mepo3g03565 465 FunFam Aspartic proteinase nepenthesin-2 56 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03565 Mepo-Chr3 45433132 45434923 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03565 63 463 Miscellaneous Gene Families AT1G44130 25.517 1.36e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03565 - - psat:127125583 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03565 3 45433132 45434923 Mepo3g03565 3 45433132 45434923 ECH