Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03549 ATGGCAAGTTCGAGCCCTGCCGCAGTCAACAAAAGACTAGAAGGAAAAGTGGCCTTGATAACCGGTGGAGCTAGTGGAATTGGCAAACGCACTGCAGAAATTTTTGTCCAACAAGGAGCCAAAGTAGTGATCGCCGACATCCAAGATGAACTTGGACATTCGGTTGCTCAAACCATAGGACCATCAACATGTATATATGTACATTGTGATGTCACTGATGAGAGCCAAATAAAAAATGCCGTGGACACAACCGTACAAACATATGGAAAACTTGACATCATGTTCAACAATGCTGGCATAGGTGGACCTAACAACTCTCGGATCATTGACAACGATAAAGCAGATTTTGAACGCGTATTAAGCGTCAACGTGACAGGTGTTTTCCTCGGCATCAAGCACGCAGCACAAGCCATGATCCCAGCTCGCACTGGTAGCATCATAAGTACTTCTAGCATAAGCTCTTATGTTGGTGGTGCTGCCTCACATGCTTATTGTTGTGCAAAGCATGCTGTGGTTGGTTTAACTAAAAATGCAGCAGTTGAACTTGGACAATTTGGGATTAGAGTTAATTGTGTGTCTCCTTATGCTCTTGCAACTCCTTTAGCAACACAATTTGTTGGATGTAATGATGGTGAGCTTGAAGCTACCATGAACATGTTGGCTAATCTGAAGGGCGTGACTTTGAAAACTGATGATGTGGCAAATGCAGCACTTTATTTTGCTAGTGACGAATCGAGGCTTGAAGGTAAAGTAGCAATAATCACAGGAGGTGCTAGTGGCATTGGTGCAGCTACTGCTAAACTATTTGTTCAACATGGCGCTAAAGTTATCGTTGCAGATATTCAAGACGAATTAGGCCAATCTCTTTGCAAAAATATTGGCACAAAGAACATTCTTTATGTTCACTGCGATGTAACTATTGAATCAGACATTAAGAACGTGGTTGATACTGCAGTTTCAAACTACGGTAAGCTTGACATCATGTATAACAACGCTGGTATATCTGATGGCGTAAATACAGCAATATTAGATTATGATAACGAAGTTTTCAAAAGGGTATTTGATGTTAATGTTTATGGAGCTTTCTTGGGTGCTAAGCATGCTGCTAGGGTAATGATCCCACAAAAGAAAGGGGTTATTCTTTTTACTGCAAGTGTTGCTACAAAAATTGCTGGTGAAACAACACATGCTTATACTTGTTCAAAGCATGCATTGGTAGGGCTTACAAAGAATTTGTGTGTAGAATTAGGGAAATATGGTATTAGAGTTAATTGTATCTCACCTCCAGCTATTCCTACTCCAATCCTAATGAATTCATTGAAGTTGAACAAGAATGATGTGGAGCAAGTTTTGTCCTCAGTTGGTGTGTTGAAAGAGGTTGTTCCTAAAGTTGAGGATATAGCTGAGGCAGCACTTTATTTGAGTAGTGATGAGTCCAAGCTTGTGAATGGAGTCAACTTTGTTTTGGATGGAGGTTATAGCACCACCAATATGTCATGCATTTTAGCATTCAAAAGTTTGATGAACGGGACCATCAACCACATTGTTCAGTAA 1554 0.4054 MASSSPAAVNKRLEGKVALITGGASGIGKRTAEIFVQQGAKVVIADIQDELGHSVAQTIGPSTCIYVHCDVTDESQIKNAVDTTVQTYGKLDIMFNNAGIGGPNNSRIIDNDKADFERVLSVNVTGVFLGIKHAAQAMIPARTGSIISTSSISSYVGGAASHAYCCAKHAVVGLTKNAAVELGQFGIRVNCVSPYALATPLATQFVGCNDGELEATMNMLANLKGVTLKTDDVANAALYFASDESRLEGKVAIITGGASGIGAATAKLFVQHGAKVIVADIQDELGQSLCKNIGTKNILYVHCDVTIESDIKNVVDTAVSNYGKLDIMYNNAGISDGVNTAILDYDNEVFKRVFDVNVYGAFLGAKHAARVMIPQKKGVILFTASVATKIAGETTHAYTCSKHALVGLTKNLCVELGKYGIRVNCISPPAIPTPILMNSLKLNKNDVEQVLSSVGVLKEVVPKVEDIAEAALYLSSDESKLVNGVNFVLDGGYSTTNMSCILAFKSLMNGTINHIVQ 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03549 517 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 245 497 - -
Mepo3g03549 517 Gene3D - 246 507 - -
Mepo3g03549 517 Gene3D - 3 245 - -
Mepo3g03549 517 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 14 246 IPR036291 -
Mepo3g03549 517 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 248 495 IPR036291 -
Mepo3g03549 517 PRINTS Glucose/ribitol dehydrogenase family signature 138 154 IPR002347 -
Mepo3g03549 517 PRINTS Glucose/ribitol dehydrogenase family signature 223 243 IPR002347 -
Mepo3g03549 517 PRINTS Glucose/ribitol dehydrogenase family signature 17 34 IPR002347 -
Mepo3g03549 517 PRINTS Glucose/ribitol dehydrogenase family signature 164 183 IPR002347 -
Mepo3g03549 517 PRINTS Glucose/ribitol dehydrogenase family signature 185 202 IPR002347 -
Mepo3g03549 517 PRINTS Glucose/ribitol dehydrogenase family signature 89 100 IPR002347 -
Mepo3g03549 517 Pfam Enoyl-(Acyl carrier protein) reductase 256 494 - -
Mepo3g03549 517 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 385 413 IPR020904 GO:0016491
Mepo3g03549 517 FunFam Short-chain dehydrogenase reductase 246 500 - -
Mepo3g03549 517 FunFam Short-chain dehydrogenase reductase 2 245 - -
Mepo3g03549 517 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 151 179 IPR020904 GO:0016491
Mepo3g03549 517 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 IPR002347 -
Mepo3g03549 517 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 398 417 IPR002347 -
Mepo3g03549 517 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 IPR002347 -
Mepo3g03549 517 Pfam short chain dehydrogenase 16 204 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03549 Mepo-Chr3 45284166 45288588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03549 247 507 Acyl Lipid Metabolism Gene Families AT1G63380 29.259 4.35e-23 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03549 - - gmx:100802915 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03549 3 45284166 45288588 Mepo3g03549 3 45284166 45288588 ECH