Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03525 ATGAGTAGGTCAGGGCAGCCACCAGATTTGAAGAAGTACATGGACAAACAGCTTCAAATCAAGCTGAATGCAAATCGCATGATTGTTGGTACTCTCCGTGGCTTTGACCAATTTATGAATTTGGTTGTTGACAATACTGTGGAGGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGGTGATCAGAGGAAATAGTGTGGTCACTGTAGAGGCGCTTGAACCAGTGAACAGAAGCATCTAA 243 0.4321 MSRSGQPPDLKKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPVNRSI 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03525 80 SUPERFAMILY Sm-like ribonucleoproteins 9 76 IPR010920 -
Mepo3g03525 80 CDD Sm_G 6 74 IPR034098 GO:0000387|GO:0005681
Mepo3g03525 80 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN 3 79 IPR044641 -
Mepo3g03525 80 FunFam Small nuclear ribonucleoprotein G 1 76 - -
Mepo3g03525 80 Pfam LSM domain 9 71 IPR001163 -
Mepo3g03525 80 SMART Sm3 8 72 IPR001163 -
Mepo3g03525 80 ProSiteProfiles Sm domain profile. 5 76 IPR047575 GO:0003723
Mepo3g03525 80 PIRSF Lsm7 5 79 - -
Mepo3g03525 80 Gene3D - 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03525 Mepo-Chr3 45057549 45059313 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03525 K11099 - gmx:100305530 154.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03525 3 45057549 45059313 Mepo3g03525 3 45057549 45059313 ECH