Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03524 ATGGCAGAAGTGCTTCAATTACCTTCACCTTCAAGCTGTTCTTCAAGTCCATTCAATGATGTGTCACACTCACAACAACACCACCAAACTAATTCTTCACCTTTTAACAACAGCGACAATGAAACTGTCATGACCCATTACCAGATTCAACAACAACAACAACAACAACAACAAGAATCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGATCAACTTTCTATTTTGACTCTTTTGATTGCTACGTTTAGGAAATCTTTGATTGGTTGTACCAACACTGGTTCTGAACTTTCTTCTTCTTCTTCAATGGAAATTGGTTGGCCTTCTAATGTTAGACATGTTGCTCATGTTACTTTTGATCGTTTTCATGGCTTTCTTGGTTTGCCTGTTGAATTTGAACCTGAAGTTCCAAGAAGACCTCCTAGTGCCAGCACAAGTGTTTTTGGTGTTTCAACAGAATCTATGCAGCTTTCTTTTGATGCCAGAGGAAATAGTGTACCTACAATACTGCTGTTAATGCAAAGGCATCTGTATGCACAAGGAGGCCTGCAGGCTGAAGGAATCTTCAGAATTAATGCTGAAAATAGTCAAGAGGAGTTTGTGAGGGAACAATTGAACAGAGGAGTGGTACCAAATGGTATTGACGTGCATTGCTTGGCAGGTCTTATAAAGGCTTGGTTCAGAGAACTTCCAACTGGGATATTGGACCCTCTTTCGCCAGAGCAGGTGATGCAGTCCCAAACAGAAGAAGAATGTGCTCAGCTTGTGAGGCTTCTTCCTTCAACAGAAGCCGCCCTCCTAGATTGGGCAGTAAACCTAATGGCAGACGTTGCTCAGATGGAACATTTGAACAAGATGAACGCACGTAATATTGCAATGGTTTTTGCACCAAACATGACTCACATGGTAGATCCCTTGACTGCTCTGATGTATGCTGTACAAGTCATGAATTTCCTCAAGACTCTAGTAGCAATGACACTGAAAGAAAGAGAGGAGTCAATCACAAAATCAAATCCCTCTTCAAACCTAAATTCTTTTGATGACGACGGGCATCAGAGCGATTCACCGTTGCTTTTCAAGGATGAAAGTGAATACGGAAATGATTACAGCGACGAGGACACAGTTTTTGTCACCACCGAGCCTTCACAACAAAGTCCTACACATCTTTTTAAAGATGACTGTGAAACTGAAAGTGGATCCCAAAGTCTGCAAACATCTACCGAAAATTTTATTTCTTGTGGAAATAGGTTGCTGGTTGACAGTTGTCCTTGTGGCGTTGTCTCTCAAATTTGCTCTATGGCAATTGGGGATCAAACAAAAAATTGCAAAAGCCTTCAGTTGAATACTTCTGATACAGACAAGTGTTCAGCAGGATCGGTGGAGAAGAACAGGGGAATTGCTCTTATTGGACGAATAAATTCAAGATCCGAGTTGGCTGAAGCTTGGCGTTGA 1458 0.4122 MAEVLQLPSPSSCSSSPFNDVSHSQQHHQTNSSPFNNSDNETVMTHYQIQQQQQQQQQESEEEEEEEEEEEKDQLSILTLLIATFRKSLIGCTNTGSELSSSSSMEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEPEVPRRPPSASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIFRINAENSQEEFVREQLNRGVVPNGIDVHCLAGLIKAWFRELPTGILDPLSPEQVMQSQTEEECAQLVRLLPSTEAALLDWAVNLMADVAQMEHLNKMNARNIAMVFAPNMTHMVDPLTALMYAVQVMNFLKTLVAMTLKEREESITKSNPSSNLNSFDDDGHQSDSPLLFKDESEYGNDYSDEDTVFVTTEPSQQSPTHLFKDDCETESGSQSLQTSTENFISCGNRLLVDSCPCGVVSQICSMAIGDQTKNCKSLQLNTSDTDKCSAGSVEKNRGIALIGRINSRSELAEAWR 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03524 485 Pfam RhoGAP domain 169 303 IPR000198 GO:0007165
Mepo3g03524 485 CDD CRIB 105 145 - -
Mepo3g03524 485 Pfam P21-Rho-binding domain 106 133 IPR000095 -
Mepo3g03524 485 CDD RhoGAP 169 324 - -
Mepo3g03524 485 FunFam Rho GTPase-activating protein 5 137 330 - -
Mepo3g03524 485 Gene3D CRIB domain 101 136 IPR036936 -
Mepo3g03524 485 ProSiteProfiles CRIB domain profile. 107 120 IPR000095 -
Mepo3g03524 485 MobiDBLite consensus disorder prediction 1 73 - -
Mepo3g03524 485 MobiDBLite consensus disorder prediction 338 353 - -
Mepo3g03524 485 MobiDBLite consensus disorder prediction 335 365 - -
Mepo3g03524 485 ProSiteProfiles Rho GTPase-activating proteins domain profile. 152 336 IPR000198 GO:0007165
Mepo3g03524 485 Coils Coil 46 78 - -
Mepo3g03524 485 SUPERFAMILY GTPase activation domain, GAP 146 325 IPR008936 -
Mepo3g03524 485 SMART RhoGAP_3 166 326 IPR000198 GO:0007165
Mepo3g03524 485 MobiDBLite consensus disorder prediction 58 73 - -
Mepo3g03524 485 PANTHER MKIAA1688 PROTEIN 21 395 IPR044785 GO:0005096
Mepo3g03524 485 Gene3D Rho GTPase activation protein 140 339 IPR008936 -
Mepo3g03524 485 MobiDBLite consensus disorder prediction 382 403 - -
Mepo3g03524 485 SMART PBD_5 107 141 IPR000095 -
Mepo3g03524 485 MobiDBLite consensus disorder prediction 7 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03524 Mepo-Chr3 45044318 45050105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03524 - - gmx:100783118 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03524 3 45044318 45050105 Mepo3g03524 3 45044318 45050105 ECH