Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03507 ATGAAGAAGCATATACTAAAACCAATAGCAAAACCACCACCACCACCAATCCTCAACCCACCACCCCCACCACCACAAATCACATCACTCTTCCCTCCAACATTCTCCCCCCCAACATTCTCCCCCACTCAACACTACACCCACTTCCTCCACTTCCTCAACCACCACCTCACTCCACCTCTCACCCCACAAACTCTAACCCACTTCCTCAAATCCAAACTCCACCACCACCCTTCCTTCACCCACTTCGACTTCCATCTCTTCTCTTGGGCTTCCACCCTTGACACCTTCTCTCACAACCACACCTCCTACCAATGGATGACACGCACCCTCGCTCTCTCTCATCGTTTCTCTCTCCTCCGCACCCTCCTCACCTTCATCTCCACCAATCCCTGCCAATGCTCTCAAGCCATCTTCTCTTGCCCACAAACTGAACCCATTTTCCGTTTTGCAATTCAGTCTTACTGTAAAGCTTTCAAGTTTGATGATGCTGTTTATGCTTTTAATGTTATGCGCAGGTTAATTGACGGAAAACCGAGTGTTTCGGTTTGTAATATTTTGATTCATGGGTTTGTTAAATCTGGTAGATTTGATAGAGCTTTTGAGTTTTATAATCAGATGGTTAAGGATAGGATTAAGCCTGATGTGTTTACTTTTAATATTTTGATTAGTGGTTATTGTAGGGATTTTAAATTTAGTCGTGCATTGGAGATGTTTGATGAAATGAGAAAAATGGGGTGTCATCCAAATGTTGTTACTTTTAATACTTTGATTAGAGGGTTGTTTAGGGAATGTAGGGTTGATGAAGGGATTGGGATGGTTTATGAGATGATTGAATTGGGATGTCAGCTTTCTTATGTTACTTGTGAGATTTTGGTTGATGGGCTTTGTAAGGAAGGGAGGGTTTCGCAGACGTGTGATTTGTTGATGGAGTTTTCAAAGAGAGGGGTTTTGCCTAAAGGGTATGATTATTTTGTTTTGGTGGAAATTTTGTGTGGGAAAGGTGATGCTTTTAAGGCTTTGGAGGTTATTTATGAGTTGTGGAGCAAAGGTTGTGTTCCTAGCTTGATTTCTTGTATTGTAATGATTGATGGTTTGAGAGGATTGCAGAAGATTGAAGAGGCAATGAGATTGGTTGAAAAAATGCTTAAAGAGGAGGGTATGGTACTTGATGTTGTGACTTTCAATTCTATCCTTGAAGATCTTTGTGATGTGAGAAGGACTGAAGATGCAAATAGGTTGAGGTTACTTGCTTCAAGCAAGGGTTTGGAACCTGATGCCATGACTTATAAAATTCTGGTTGCTGGGTATAGAGGAGAGGGAAATCAATCGGAAGGAGAGTTAGTGGTAAATGAAATGTTGGATAAGGGGTTTATACCTGATCTTGCTTCATATAATAAATTGATGGATGCACTATCTAATTGTCATCGCCTTAAGCGTTATCAAGCGAACCAAATTGGCAGGTGA 1467 0.4151 MKKHILKPIAKPPPPPILNPPPPPPQITSLFPPTFSPPTFSPTQHYTHFLHFLNHHLTPPLTPQTLTHFLKSKLHHHPSFTHFDFHLFSWASTLDTFSHNHTSYQWMTRTLALSHRFSLLRTLLTFISTNPCQCSQAIFSCPQTEPIFRFAIQSYCKAFKFDDAVYAFNVMRRLIDGKPSVSVCNILIHGFVKSGRFDRAFEFYNQMVKDRIKPDVFTFNILISGYCRDFKFSRALEMFDEMRKMGCHPNVVTFNTLIRGLFRECRVDEGIGMVYEMIELGCQLSYVTCEILVDGLCKEGRVSQTCDLLMEFSKRGVLPKGYDYFVLVEILCGKGDAFKALEVIYELWSKGCVPSLISCIVMIDGLRGLQKIEEAMRLVEKMLKEEGMVLDVVTFNSILEDLCDVRRTEDANRLRLLASSKGLEPDAMTYKILVAGYRGEGNQSEGELVVNEMLDKGFIPDLASYNKLMDALSNCHRLKRYQANQIGR 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03507 488 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 285 319 IPR002885 -
Mepo3g03507 488 Pfam PPR repeat 360 385 IPR002885 -
Mepo3g03507 488 Pfam PPR repeat 183 211 IPR002885 -
Mepo3g03507 488 Pfam PPR repeat 287 317 IPR002885 -
Mepo3g03507 488 Pfam PPR repeat 152 173 IPR002885 -
Mepo3g03507 488 Gene3D Tetratricopeptide repeat domain 267 368 IPR011990 GO:0005515
Mepo3g03507 488 Gene3D Tetratricopeptide repeat domain 139 266 IPR011990 GO:0005515
Mepo3g03507 488 Gene3D Tetratricopeptide repeat domain 369 486 IPR011990 GO:0005515
Mepo3g03507 488 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL 66 366 - -
Mepo3g03507 488 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 180 214 IPR002885 -
Mepo3g03507 488 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 391 425 IPR002885 -
Mepo3g03507 488 NCBIfam pentatricopeptide repeat 252 284 IPR002885 -
Mepo3g03507 488 NCBIfam pentatricopeptide repeat 217 251 IPR002885 -
Mepo3g03507 488 NCBIfam pentatricopeptide repeat 183 216 IPR002885 -
Mepo3g03507 488 NCBIfam pentatricopeptide repeat 287 319 IPR002885 -
Mepo3g03507 488 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 215 249 IPR002885 -
Mepo3g03507 488 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 250 284 IPR002885 -
Mepo3g03507 488 Pfam Pentatricopeptide repeat domain 420 472 IPR002885 -
Mepo3g03507 488 Pfam PPR repeat family 214 262 IPR002885 -
Mepo3g03507 488 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 426 460 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03507 186 486 Miscellaneous Gene Families AT4G11690 31.229 6.05e-47 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03507 - - aprc:113860936 613.994