Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03472 ATGGTTTATACCATTTCTGGAATTCGATTTCCCGTTGTTCCTTCTCTGAATAAGTCCAGCTTACGAGGTGGCGATCGCAGAACTTCTTATTCTAACTCCTTCTTTCTTAAGAAGAATTCATCATCATTCTCGAAGACTTCACTATATGCAAAGTTTTCCCATGATTCTGAAACCAAATCTTCCACAATTGCTGAATCTGATAAAGTACTTATTCCAGAAGATCAAGATAACTCTGCATCCGTGACGGAACAACTTGAAAATCCTGATATAACCTCAGAGGATGCACAGTCTTTTCAGAACTTGGAGGATTTAACCATGAAAGATGAGAATAAGTACAATGTTGATGAAGCAGCTAGCAGTTATAGAGAGGTCGGAGATGACAAAGGTTCTGTTATCTCATCATCACTTGTGGATGTTAACACTGATGCTCAAGCCAAGAAGACATCAGTTCATTCAGACAAGAAAGTAAAAACAGATAAACTTAAGGTCATTCCTCCACCTGGTGCTGGACAGAAAATATATGAGATTGATACATTTTTACAAGCTCACCGTCAGCATCTTGATTTCCGCTATGGACAGTACAAAAAAATTCGGGAGGAAATTGACAAGTATGAAGGTGGTCTTGATGCATTTTCTCGTGGGTACGAAAAGTTAGGCTTCACACGCAGTGCTACAGGCATTACTTACAGAGAGTGGGCACCTGGAGCTAAGTCAGCAGCATTAGTTGGAGATTTCAACAATTGGAATCCAAATGCAGATGTAATGACCCGGGACGATTTTGGTGTGTGGGAGATCTTCTTGCCAAATAATGCCGATGGTTCACCACCAATACCTCATGGTTCTCGAGTCAAGATCCACATGGATACACCCTCTGGGATCAAGGACTCAATTCCTGCTTGGATCAAATTCTCTGTACAGGCTCCTGGTGAAATTCCATATAATGGAATATACTATGATCCCCCAGAGGAGGAAAAATATGTCTTCAAACATCCACAGCCAAAGCGACCACAATCAATTAGGATATATGAGGCACACGTTGGAATGAGTAGCCCGGAGCCAAAAATCAACACATATGCCAATTTTAGAGATGATGTACTGCCTCGCATTAAAAAGCTTGGCTATAATGCTGTCCAGATTATGGCTATCCAAGAACATTCTTACTATGCTAGCTTTGGGTACCATGTTACTAATTTCTTTGCACCTAGCAGTCGGTTTGGAACTCCAGAAGATCTTAAGTCTCTGATAGACAGAGCCCACGAACTAGGCCTGCTTGTTCTGATGGATATTGTACATAGCCATGCATCAAGTAATACATTGGATGGCCTCAACATGTTTGATGGAACTGATGCTCATTATTTCCATTCTGGTTCACGGGGTTATCATTGGATGTGGGATTCTCGCCTTTTTAACTATGGAAGCTGGGAAGTCCTAAGGTATCTACTTTCAAATGCTAGATGGTGGCTGGATGAATATAAGTTTGATGGGTTTCGATTTGATGGTGTCACATCAATGATGTACACTCATCATGGACTGCAGGTATCTTTTACTGGAAATTACAATGAGTATTTTGGTTTTGCAACTGATGTTGAAGCTGTGGTTTACCTGATGCTTGTTAATGATCTCATTCATGGGCTCTATCCTGAAGCTGTTTCAATTGGTGAAGATGTGAGTGGAATGCCAACATTCTGCCTTCCGACACAAGATGGTGGGATTGGCTTTAACTATCGCTTGCATATGGCCGTTGCAGACAAGTGGATTGAGCTTCTTAAGAAAAAAGATGAAGATTGGAGAATGGGTGATATAGTCCACACACTGACAAACAGAAGGTGGCTAGAAAAATGTGTGGTTTATGCTGAAAGTCATGACCAAGCCTTGGTTGGTGACAAGACCCTAGCATTTTGGTTGATGGACAAGGATATGTATGACTTCATGGCTTTAGACAGACCATCTACTCCTCTAATCGATCGTGGTATTGCATTACACAAAATGATTAGGCTTATTACTATGGGCCTTGGTGGTGAAGGGTATTTAAATTTTATGGGGAATGAATTCGGCCATCCTGAGTGGATCGATTTTCCAAGGGGTGATCAACATCTCCCTAATGGCACAATAGTTCCTGGGAATAACAACAGTTATGATAAATGCAGGCGTAGATTTGACTTGGGTGATGCAGAATATCTAAGATATCATGGAATGCAAGAATTTGATCGAGCTATGCAGCACCTAGAAGAAAGATATGGTTTCATGATTTCTGAGCACCAATATATTTCAAGGAAAAATGAAGGTGACAGAGTTATAATCTTCGAAAGGGACAACCTGGTCTTTGTATTCAATTTTCACTGGACCAACAGTTATTCAGATTACAAAGTTGGCTGTTTAAAGCCAGGGAAATATAAGATTGTCTTGGATTCAGATGAGTCCTTGTTTGGTGGCTTCAATAGGCTCAATCATACTGCTGAGTACTTCACTTCGGAAGGATGGTATGATGACCGGCCTCGTTCCTTCCTCGTTTATGCACCTTGTAGAACAGCAGTGGTATATGCTCTTGTAGATGGAGTTGAATCAGAGCCGGTTGAACTGTCAGTTGGAGTTGAATCAGTGACAATTCAACAGTCAGTTGAAGTTGAACCCTGA 2634 0.4108 MVYTISGIRFPVVPSLNKSSLRGGDRRTSYSNSFFLKKNSSSFSKTSLYAKFSHDSETKSSTIAESDKVLIPEDQDNSASVTEQLENPDITSEDAQSFQNLEDLTMKDENKYNVDEAASSYREVGDDKGSVISSSLVDVNTDAQAKKTSVHSDKKVKTDKLKVIPPPGAGQKIYEIDTFLQAHRQHLDFRYGQYKKIREEIDKYEGGLDAFSRGYEKLGFTRSATGITYREWAPGAKSAALVGDFNNWNPNADVMTRDDFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYVFKHPQPKRPQSIRIYEAHVGMSSPEPKINTYANFRDDVLPRIKKLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPEDLKSLIDRAHELGLLVLMDIVHSHASSNTLDGLNMFDGTDAHYFHSGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLDEYKFDGFRFDGVTSMMYTHHGLQVSFTGNYNEYFGFATDVEAVVYLMLVNDLIHGLYPEAVSIGEDVSGMPTFCLPTQDGGIGFNYRLHMAVADKWIELLKKKDEDWRMGDIVHTLTNRRWLEKCVVYAESHDQALVGDKTLAFWLMDKDMYDFMALDRPSTPLIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGDQHLPNGTIVPGNNNSYDKCRRRFDLGDAEYLRYHGMQEFDRAMQHLEERYGFMISEHQYISRKNEGDRVIIFERDNLVFVFNFHWTNSYSDYKVGCLKPGKYKIVLDSDESLFGGFNRLNHTAEYFTSEGWYDDRPRSFLVYAPCRTAVVYALVDGVESEPVELSVGVESVTIQQSVEVEP 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03472 877 MobiDBLite consensus disorder prediction 62 91 - -
Mepo3g03472 877 PIRSF GlgB 82 858 IPR037439 GO:0003844|GO:0005978
Mepo3g03472 877 CDD E_set_GBE_euk_N 225 318 - -
Mepo3g03472 877 SUPERFAMILY E set domains 211 320 IPR014756 -
Mepo3g03472 877 MobiDBLite consensus disorder prediction 73 91 - -
Mepo3g03472 877 Pfam Alpha amylase, C-terminal all-beta domain 755 849 IPR006048 GO:0003824|GO:0005975|GO:0043169
Mepo3g03472 877 CDD AmyAc_bac_euk_BE 322 737 - -
Mepo3g03472 877 Gene3D Immunoglobulins 213 325 IPR013783 -
Mepo3g03472 877 Pfam Alpha amylase, catalytic domain 366 438 IPR006047 GO:0005975
Mepo3g03472 877 Gene3D Glycosidases 177 746 - -
Mepo3g03472 877 FunFam 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic 751 851 - -
Mepo3g03472 877 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 217 300 IPR004193 GO:0004553|GO:0005975
Mepo3g03472 877 SUPERFAMILY (Trans)glycosidases 329 746 IPR017853 -
Mepo3g03472 877 SMART aamy 356 716 IPR006047 GO:0005975
Mepo3g03472 877 Gene3D - 751 857 IPR013780 -
Mepo3g03472 877 FunFam 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic 213 325 - -
Mepo3g03472 877 SUPERFAMILY Glycosyl hydrolase domain 752 850 - -
Mepo3g03472 877 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 149 851 - -
Mepo3g03472 877 FunFam 1,4-alpha-glucan branching enzyme 320 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03472 Mepo-Chr3 44623753 44642919 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03472 1 843 Glycoside Hydrolase AT2G36390 74.852 0.0 1306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03472 K00700 - gmx:100785968 1518.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03472 3 44623753 44642919 Mepo3g03472 3 44623753 44642919 ECH