Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03452 ATGTATGCAACACATAAGCTTCATTTCACAAATATCATTCTCGTTCTATTCTTTTCTACCACCTTAACATCTTTAGCAACAACCACCACTTCCATCCCACAAGAGCTTCTCAATGGCTTCTCTTCATCTCCACTCTCAACAACCACCTCCTTCCAACCCATCCTCACCGATCCAACCGGAAACTTCTCTCTTGGGTTCCTCCGCCACAACCAAAACGACCTAAAACTCGCCGTTGTTCACATCCTTTCCCTTGAACCACTATGGACAGCAAACCCAACCCACACCGCAACGTGGTCCCACACCACGCGCCTCTTCTTCAACGGCAGTCTTGTTTTGTGGGACCCAAAAAGAACCCTATCATGGTCAACAACCACCAACGGTGAGCGCGTGGTTCTTCTCAATACCTCAAACTTACTAGTACAAACAACCTCAAAAACACCACTTTGGGAAAGTTTCCATTTTCCCACAAATACACTCGTTCAAGATCAAAACTTCACTTCAAACATGTCTTTAGTATCAACCAATAATCTCTACTCTCTACGTTTAGGTGACACTTTCATGGGTTTATACGAAAATCACGACAAAGAAAAAGGTAGTTTGTTAACAAAACGGTTATTTTTGTTATATTGGAAACGTTCTGCACTACAAGCAAAATCTACAATCATAGAAGGTGATGGACCCATTTACGCAAGAGTAAGCACCGAGGGTTATATTGGAATGTACCAAACAAGTTCTAAACCTGCTGATGTTCAGAAATTCAACAGTTTTCAAGAAACTTCGTCGTTCCTTTTGGTTAGGTTAGAACAAGACGGGAATCTCAAAGGGTATTATTGGGATTCAACAAAGTCTAGTTGGATACTTAACTTCCAAGCTATTAGTGAAACTTGTGAGCTTCCAAATCCATGTGGTTCGTATGGTTTGTGTACTCCGGGTGGGTCTAGTTGTTCTTGTTTAGATAGCAAAGCCAGGTTTGAACCGGGTGGGTGTTTTAGTGATGGAGGTGGAGATTTGTGTGGTGGAGGGATTGGTGAAGAGAATAGTTACAAGATTCTGAGAAAGGTTGGAGTGGAGCCACCGCATAAAGAGTTACTAGAGGAAGTAACAACGTTATCTTTAACAGAATGTGAGGGTTTGTGTGAGAAAAATTGTAAATGTTGGGGTGCGTTGTATAATAACCAAACCGGGTTTTGTTATGTTTTGGATTATCCAATAGGAACAATGTTAGGAACAGGGGATGAGTCAAAGGTGGGTTTTTTTAAAGTGAGGAAAGGTGCACGGAGAAGGAATAGGGTTGGGGTTATTGTTGGAATTGTAGTTGCTGTTTTGGTCGGGATTGTTATTGTTGGTGTTGTGATTTGTGTAGTGAGGTGGAAAAAGAGAAAAGGGGGTATGAAAGAGGAGGAAAATTGGGCTTCACCTGGCCCGTATAGGAATCTTGGATCCGAAAGTTTTAGATCCGTTGAGATGTCGAGTAGTGCGCATTAA 1485 0.4195 MYATHKLHFTNIILVLFFSTTLTSLATTTTSIPQELLNGFSSSPLSTTTSFQPILTDPTGNFSLGFLRHNQNDLKLAVVHILSLEPLWTANPTHTATWSHTTRLFFNGSLVLWDPKRTLSWSTTTNGERVVLLNTSNLLVQTTSKTPLWESFHFPTNTLVQDQNFTSNMSLVSTNNLYSLRLGDTFMGLYENHDKEKGSLLTKRLFLLYWKRSALQAKSTIIEGDGPIYARVSTEGYIGMYQTSSKPADVQKFNSFQETSSFLLVRLEQDGNLKGYYWDSTKSSWILNFQAISETCELPNPCGSYGLCTPGGSSCSCLDSKARFEPGGCFSDGGGDLCGGGIGEENSYKILRKVGVEPPHKELLEEVTTLSLTECEGLCEKNCKCWGALYNNQTGFCYVLDYPIGTMLGTGDESKVGFFKVRKGARRRNRVGVIVGIVVAVLVGIVIVGVVICVVRWKKRKGGMKEEENWASPGPYRNLGSESFRSVEMSSSAH 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03452 494 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 284 IPR036426 -
Mepo3g03452 494 Pfam D-mannose binding lectin 88 179 IPR001480 -
Mepo3g03452 494 Pfam PAN domain 365 401 IPR003609 -
Mepo3g03452 494 Gene3D - 46 153 IPR036426 -
Mepo3g03452 494 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 464 - -
Mepo3g03452 494 Pfam S-locus glycoprotein domain 255 319 IPR000858 GO:0048544
Mepo3g03452 494 PIRSF SLG 3 435 IPR035446 -
Mepo3g03452 494 ProSiteProfiles PAN/Apple domain profile. 338 423 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03452 Mepo-Chr3 44465016 44467508 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03452 - - tpra:123890423 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03452 3 44465016 44467508 Mepo3g03452 3 44465016 44467508 ECH