Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03450 ATGGAGTTTAGAGAAACAGAGAAAAAAGAGGTTAATTCACAGATTCCATGGCTACCCACTACACCATATAAGCCAATTGCTCAAAGACCAGTGCCGATCTACACTCCTGGAGAGAGAAATCAGCTCAACTCTCATATCAATGGTGAATTTGCATCTTTTGAGTCTTCAAGCGGTGGAGGTGTTAACAACCGTCCAGAATCTGTGGCTGTAACATTAAACATTGGTCATGAAAATGCCAGAACTCGGGTACCGATATCGTTCGATAATCCGGGCTCGAGTAATAGTTTTGCTGAACTTTTGGCTCAGGCTGAGGCTCCTGCATCAGCGGCATATTGCACTTCACCATATGGATATTTAGGGGACCAATTTGTTCCTGGTGTATTGAACTTGAACCCACAGTTCAACAAAAGTTATGCATTTCTTGGCCAGCACAATATTTATCAGCAACAACTCTTCAACAATTTCATCTGTGACAATTACCAAGATCCTCAGGGCACACCGCACTTGGCTTATTATAACAAGACCGATTCCCAGGTTGCTCGGCCTCCAGAAAATAACATAACATCAAAAGACAAACAAGTTGTGGAGACACAAATAAACATGGAACAATGGGATCAAAGGGAAGATAAGAGTAATGCCTCAGCCACTATGTGCAACAGTTCACACAACAAACTTTATGACCCTGTTGTAGACTTGGCTGCTGTTTCTACACCAAGCAAAGAGAATAAGAACCACAATAAGGAGATACACCATGTTATTGATCTTAATGAAATACCCCAAACAAAACCAAAAAGAAGAAAGCATCGCCCCAAGGTCATAAAAGAAAGCAAACCCAAAAAAACTCCAAAGCCAGCCACTCCAAAGCCTGATCAATCAAAAGAAAACTCAACTCAAAAGAGGAAGTATACAAGAAAGAAAGAACCAAATGCAACTCCAGCAAAAGTGTCAGGGGAATGCACTGAACCGTTGATGTCAGAATCTGCCAAAAAGACATGTAGAAGGTCCTTACACTTTGACATTCCAGAGCAACCAACAGATGGAAATTCTGCGTGTAGGGAAGAAAATGCAACTACACATTTTGGTGGAGAAATTAGCATAGAGGTTCAGGAAACACATGTGTTAAATAATCACATGACATTACATGAAGATGCACAAGCCTCCAGCAGTAACAGAAAACTTTCAAGTACAGGGTCACAAGAAGTTGGTTCCAAGAAAAAGCTGTCTGCTACCACTAAGCAAGCAGACAACGGTAGCATTAATCTGCTTGGGGCACAATATAATCAAATGCAGGCATACCAATCAAAGTATTGGCTTCAATTTCCGAATGTTCAGAAGAAAAAGAGAAGTGAGAAGGGGAAATTTTCAAATATTCCCAATACATCTTCCATGAATGCTGCTCAAGATGTACAACTTCCAACATGTTCTGAAGAAAATGCGAGATCACATCCGGATGCATCAACTTCTAATGTGTGGACTACTGCTTCTGCTTCTGAATATGAAACAGCGCAACTCCTAACCATGCTCAAAGTTACAGAAATAGCCACCCATGACAAATCTCGATCACTTGAGTACAATTTATTTTCAGGACAGAGCAGACCAACCAAAAAAAGATCGAGAGTCACTACCAGAGCTCATGATTACACTTCTCTGAGCAAAATTACAAACTATGATGCCAAACTAACTAATATTGTGAACCCAGGCAGTTCCGAAAGACAAACATTTGAGGATGCAGAAAGACCACAAACCGGCATTGATGCTCTAGTTGCGGAGATGCGTGCATCACTCACAAAAAAGAAACGGAGTAAAAAGAGAAGTACTCCAATCAGTTCGACATATTCTTGCCTAAATGAAATGCAACATCATCTGCCCTTGCACAACTCATTAGGTGTTGCTTGCGGAGAGAGCTGGAAAAACATACCTACTGTGGACAGATTAACACAGCAGTTTAGACACCTAAGCATATATAGAGAAGCTAGAGAGCTTGTATTATACGGGCAGAATGCACTTGTCCCTTACAACTGGCAAAATGAAAAACGCAAAGGTCGGGTTCATGAAAATGGCACCATCATTCCCTACGAGGGCATGTTTGATCCCATCAAGAAACAGCGCCCACGACCTAAAGTTGATCTTGATGAGGAAACCAATAAAGTGTGGAAGCTTCTGATGTTGGATATAAATAGTCATGGGGTTGATGGAACAGATGAAGACAAGGCCAAATGGTGGGAAAATGAACGAAATGTTTTCAGAGGAAGAGCAGAGTCATTTATTGCACGGATGCATCTTGTTCAAGGAGACCGACGCTTTTCTCGATGGAAAGGATCAGTGGTGGATTCGGTGGTTGGAGTTTTTCTCACTCAAAATGTCTCGGACCATCTATCTAGTTCTGCATTCATGTCACTCATTGCTCGATTTCCCCTTAAGTCAAGCAGCATGTTCGATACATGCCACGAGGAAAGTGCAAGCATGATAGTCAACACACCAGAGGTGCAAATTGTGGAACCAGAAGAAAATGCAAAGCTGGATGAAATAATATTGAATCAATCTGTTCAAGAATTGAGTTCTATGACAAAAGACATCATTGAACATTCTGAAGAAAGAGAAACTGTTGACAGCAACAGCATTGATTCCTGTGGAACTACTGGGAGCCTAGATAGCTTAAAAGATGTATCAAATTGTAAACTGTCAGAACCAGCTCAAAGAAATATTATGGAACATGGTACAATGGAATTTGTTAATCCATTGACTGGGGAAGGGCAAGAAAATTCATGTCATGGGGGTATTAGGAAAGAGTCCAATGCTTTATTTTCACCCAATTGCTCCATTGTTACATCTCAGTTGTCTGGAGATTTTTCAATTGATCAAAATCCTGAGAAGATAGGATCATTCTCAGACAGCAACACAGAAGTAGAAGATCGGTTAAGCACAGCTGAATACAATTTTTCCAACAGGACTTCTTTCAGTAAGCTTTTAGGAATGGCAAATTCGACCCAGTTACATGAAGTTAACAGTCAGAGAAGCAATCCAACTGAGAATTTGAGAGATTTATATGGTCAACTTGTAGCTATGAGGCATGACAGCTTGGAAGAGAACTTGGAAAAATCAAATGTTACTCAAAGCTCCTTAGAAGCAATCATGACGCAATGCAATGGCCATAATTTGAAAATGACTCCCAACTCTGAAGTCCATGAAGTCAACTTCTATAAACCTCTCAATGTTGAAGCCTCATCAAGTGGCTCCTCAAAGAATACAAATGAAAATAACAAAAGCTGTGGTACTCCAACGGAATCTGAAAGCCAAGCTGCAATTACCGACTCTCACAGCATGCTATCCCAAGTCCCTCTTCAGCAACATAGTGATCACCAGCAGCACAAAGTTTTCCACATTTCTGGACAAAGTAAAGATCTTATGGAGAAATCAAAGGAATCAGATTTTGGTGACCACAACTATGCCATGAGGAATGAAAACAGTAAGTTAGATTCTGCCCCTGTAAAAAAATTAAAGGACAAGGAGCGTGGGAAAGAGAAGAAGGATAACTTCAATTGGGATAGTTTAAGAATACAGGCACAAGCTACAGCTGGGAAGAGAGAAAAGACAGAAAGCAACATGGACTCATTGGACTGGGAAGCTGTGAGACGGGCAAACGTCAAGGAAATTGCTGATGCAATCAAAGAGAGGGGCATGAACAACATGCTTGCTGAACGCATTCAGAGTTTCCTGAATCTACTCGTTGAAAAACACGGGGCTATTGATCTCGAGTGGCTTAGAGATGTTCCACCTGACCAAGCAAAAGAATTCTTGCTCAGCATAAGGGGATTGGGATTGAAAAGTGTGGAGTGTGTGCGACTATTAACACTGCACCATCTTGCTTTCCCGGTGGACACAAATGTTGGGCGTATTGCAGTGCGATTGGGATGGGTACCTCTCCAGCCATTGCCCGAGTCACTACAGTTGCATCTTCTAGAATTGTACCCGGTGTTGGAATCCATACAAAAATATCTCTGGCCCAGGCTGTGCAAGCTTGACCAAAAAACATTGTACGAGTTGCATTACCAGCTGATTACATTTGGAAAGGTCTTCTGTACAAAAAGCAAACCAAATTGTAATGCATGTCCAATGAGGGGGGAATGCAGACACTTTGCCAGCGCTTTTGCAAGTGCAAGGCTTGCCTTACCAGGACCGGAGCAGAAGGAGCAGAAGAATTTAGTTATCGCAACTGGAAACAATGCAACAGATCAGAACCCATCAACAACCGTCAATCAGTTGCCTTTGTCTCTCCCAGGACTGGAGCAGAAGAACATTGAGATCACAACTGGAACCGATGCAACTGATCAGAACTCGTCAGTAGTCATCAATCAATTGCCCTTGTCTCTCCCTGAAAACAAAAACCAAACAGAAGAACTTCAACAAACAGCAGTGATCAGGCAACTTGAAATGAATTCTGAAATCAATAACTGCCAACCCATTATTGAAGAGCCAACGACTCCAGAGCCAGAGTGCTCCCATGTATCTGAAAATGATATAGAGGATTTTTTCTATGAGGAATCAAATGAAATTCCAACCATCAATCTAGACATAGAAGAGTTCACTTTGAATTTACAAAATTATATGCAAGAAAACATGGAACTTCAAGAAGGTGAAATGTCAAAGGCCTTGGTTGCTCTAAATCAAGAAGCTGCTTACATTCCTACAACGAAGCTGAAGAACGTGAGTCGGTTGCGCACAGAGCATTCTGTTTATGAACTCCCAGATTCTCATCCTCTTCTGGAAGGGTGGGAAAAGCGAGAACCTGATGATCCAGGAAAATACCTTCTAGCTATATGGACGCCAGGTGAGACAGCAAATTCTATACAGCCACCAGACAGAAGATGCAGCGCTCAGGATTGTGGCCAGCTCTGTAATGAGGAGGAATGTTTTTCGTGCAACAGCTTCCGTGAAGCAAATTCACAGATAGTTCGAGGGACAATCCTGATACCATGTCGAACAGCTATGAGAGGGAGCTTTCCGCTAAACGGCACCTATTTTCAAGTCAACGAGGTTTTTGCAGACCATGAATCAAGTCTTAATCCGATTAGCGTTCCCAGAAGTTTGATATGGAACCTTGATAGGAGGACAGTGCATTTTGGAACCTCCGTAACAAGCATATTCAAAGGTTTATCAACACCAGAAATTCAACAGTGCTTCTGGAGAGGGTTTGTCTGTGTGCGGGGCTTTGAAAGGTCAACGAGAGCACCCCGTCCTTTGATGGCAAGACTGCATTTCCCAGCAAGCAAGCTGGCCAAGAACAAAAAAGATTCCGCTGCGGCTGCGGCCAACTCACGGGGATCAAATTCAAACCCAAATGCAGAACAGCAACAGCCAGATTTTCTTGCCAGCATTCCCAACCTTCGACAGAACAGCGGATCATGA 5406 0.4218 MEFRETEKKEVNSQIPWLPTTPYKPIAQRPVPIYTPGERNQLNSHINGEFASFESSSGGGVNNRPESVAVTLNIGHENARTRVPISFDNPGSSNSFAELLAQAEAPASAAYCTSPYGYLGDQFVPGVLNLNPQFNKSYAFLGQHNIYQQQLFNNFICDNYQDPQGTPHLAYYNKTDSQVARPPENNITSKDKQVVETQINMEQWDQREDKSNASATMCNSSHNKLYDPVVDLAAVSTPSKENKNHNKEIHHVIDLNEIPQTKPKRRKHRPKVIKESKPKKTPKPATPKPDQSKENSTQKRKYTRKKEPNATPAKVSGECTEPLMSESAKKTCRRSLHFDIPEQPTDGNSACREENATTHFGGEISIEVQETHVLNNHMTLHEDAQASSSNRKLSSTGSQEVGSKKKLSATTKQADNGSINLLGAQYNQMQAYQSKYWLQFPNVQKKKRSEKGKFSNIPNTSSMNAAQDVQLPTCSEENARSHPDASTSNVWTTASASEYETAQLLTMLKVTEIATHDKSRSLEYNLFSGQSRPTKKRSRVTTRAHDYTSLSKITNYDAKLTNIVNPGSSERQTFEDAERPQTGIDALVAEMRASLTKKKRSKKRSTPISSTYSCLNEMQHHLPLHNSLGVACGESWKNIPTVDRLTQQFRHLSIYREARELVLYGQNALVPYNWQNEKRKGRVHENGTIIPYEGMFDPIKKQRPRPKVDLDEETNKVWKLLMLDINSHGVDGTDEDKAKWWENERNVFRGRAESFIARMHLVQGDRRFSRWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLIARFPLKSSSMFDTCHEESASMIVNTPEVQIVEPEENAKLDEIILNQSVQELSSMTKDIIEHSEERETVDSNSIDSCGTTGSLDSLKDVSNCKLSEPAQRNIMEHGTMEFVNPLTGEGQENSCHGGIRKESNALFSPNCSIVTSQLSGDFSIDQNPEKIGSFSDSNTEVEDRLSTAEYNFSNRTSFSKLLGMANSTQLHEVNSQRSNPTENLRDLYGQLVAMRHDSLEENLEKSNVTQSSLEAIMTQCNGHNLKMTPNSEVHEVNFYKPLNVEASSSGSSKNTNENNKSCGTPTESESQAAITDSHSMLSQVPLQQHSDHQQHKVFHISGQSKDLMEKSKESDFGDHNYAMRNENSKLDSAPVKKLKDKERGKEKKDNFNWDSLRIQAQATAGKREKTESNMDSLDWEAVRRANVKEIADAIKERGMNNMLAERIQSFLNLLVEKHGAIDLEWLRDVPPDQAKEFLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQKTLYELHYQLITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALPGPEQKEQKNLVIATGNNATDQNPSTTVNQLPLSLPGLEQKNIEITTGTDATDQNSSVVINQLPLSLPENKNQTEELQQTAVIRQLEMNSEINNCQPIIEEPTTPEPECSHVSENDIEDFFYEESNEIPTINLDIEEFTLNLQNYMQENMELQEGEMSKALVALNQEAAYIPTTKLKNVSRLRTEHSVYELPDSHPLLEGWEKREPDDPGKYLLAIWTPGETANSIQPPDRRCSAQDCGQLCNEEECFSCNSFREANSQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHESSLNPISVPRSLIWNLDRRTVHFGTSVTSIFKGLSTPEIQQCFWRGFVCVRGFERSTRAPRPLMARLHFPASKLAKNKKDSAAAAANSRGSNSNPNAEQQQPDFLASIPNLRQNSGS 1801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03450 1801 CDD ENDO3c 1206 1324 IPR003265 GO:0006284
Mepo3g03450 1801 MobiDBLite consensus disorder prediction 1074 1102 - -
Mepo3g03450 1801 Coils Coil 1525 1545 - -
Mepo3g03450 1801 SMART endo3end 1186 1358 IPR003265 GO:0006284
Mepo3g03450 1801 MobiDBLite consensus disorder prediction 262 276 - -
Mepo3g03450 1801 MobiDBLite consensus disorder prediction 383 411 - -
Mepo3g03450 1801 SMART ccc3 1359 1379 IPR003651 GO:0051539
Mepo3g03450 1801 MobiDBLite consensus disorder prediction 1759 1801 - -
Mepo3g03450 1801 Pfam Permuted single zf-CXXC unit 1619 1650 IPR028924 -
Mepo3g03450 1801 MobiDBLite consensus disorder prediction 277 308 - -
Mepo3g03450 1801 MobiDBLite consensus disorder prediction 238 324 - -
Mepo3g03450 1801 MobiDBLite consensus disorder prediction 448 489 - -
Mepo3g03450 1801 FunFam DNA glycosylase/AP lyase ROS1 1280 1388 - -
Mepo3g03450 1801 MobiDBLite consensus disorder prediction 454 489 - -
Mepo3g03450 1801 Gene3D - 1288 1376 IPR023170 -
Mepo3g03450 1801 MobiDBLite consensus disorder prediction 1145 1176 - -
Mepo3g03450 1801 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 175 1764 IPR044811 GO:0019104|GO:0035514|GO:0080111
Mepo3g03450 1801 SUPERFAMILY DNA-glycosylase 750 1381 IPR011257 GO:0003824|GO:0006281
Mepo3g03450 1801 MobiDBLite consensus disorder prediction 1768 1801 - -
Mepo3g03450 1801 Gene3D Hypothetical protein; domain 2 1186 1287 - -
Mepo3g03450 1801 Pfam RRM in Demeter 1653 1753 IPR028925 -
Mepo3g03450 1801 MobiDBLite consensus disorder prediction 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03450 Mepo-Chr3 44438406 44448484 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03450 - - psat:127125690 2724.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03450 3 44438406 44448484 Mepo3g03450 3 44438406 44448484 ECH
Mepo3g03450 3 44438406 44448484 Mepo4g02431 4 32483500 32493957 PCT