Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03409 ATGTTTCGAGGATTATGGGGATCACAAGAGCAACAACCACATGAAGCTTCATCACAGCAGTCATGGTATCCACCATCTATTATGAGTTCATCCAGTTCATCAAGGCCTGCTACACCTGCCTCCTCTTCCGCTTCACCAAGGCCGCCTTCTTCGCATGTTCCGCCAGCAGAAGCGGCTGGAACCATTGCTTCTTTGAAGGATAAGAGTGTTGATGAGTTAAGGAAGCTTTTGTCTGATAAAGATGCTTATCAACAGTTTCTGAATTCGCTTGAACAGGTCAAGATTCAAACCAATCTGAAAGACGAACTTGCCAAGGAAAATAGGCAGCTGGCAGAGGAAAATCTACAAAAGGAACCTCGCATGATGGAACTTAGGAATCAGTGTAGAATAATTCGTACAACCGAATTAGCTACTGCTAACGAGAAACTAAACGAGCTTGAGAAGCAGAAAGAAGAAATGTTAAAGATGAATTCCCCTGCATCCCTTCTCCAGAGAATTCAAGAATCTGTGAACCAGACAGATGAGGAATCTGAAAATCTGCACCAGCAACTCCTTGACAGAGAGATTGACCTTGCAGCTTTTTTGCAGAAATACAAGAAGCTACGCACCACTTACCACAAGAGAACTCTTATACATCTTGCTGCTAAAACATCAAATATATGA 663 0.4268 MFRGLWGSQEQQPHEASSQQSWYPPSIMSSSSSSRPATPASSSASPRPPSSHVPPAEAAGTIASLKDKSVDELRKLLSDKDAYQQFLNSLEQVKIQTNLKDELAKENRQLAEENLQKEPRMMELRNQCRIIRTTELATANEKLNELEKQKEEMLKMNSPASLLQRIQESVNQTDEESENLHQQLLDREIDLAAFLQKYKKLRTTYHKRTLIHLAAKTSNI 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03409 220 FunFam Vacuolar protein-sorting-associated protein 37 homolog 1 144 213 - -
Mepo3g03409 220 Gene3D Helix hairpin bin 142 212 IPR029012 -
Mepo3g03409 220 MobiDBLite consensus disorder prediction 1 64 - -
Mepo3g03409 220 Coils Coil 93 116 - -
Mepo3g03409 220 Pfam Modifier of rudimentary (Mod(r)) protein 66 210 IPR009851 -
Mepo3g03409 220 ProSiteProfiles VPS37 C-terminal domain profile. 140 220 IPR009851 -
Mepo3g03409 220 Coils Coil 136 156 - -
Mepo3g03409 220 Coils Coil 163 183 - -
Mepo3g03409 220 MobiDBLite consensus disorder prediction 10 47 - -
Mepo3g03409 220 SUPERFAMILY Endosomal sorting complex assembly domain 159 208 IPR037202 -
Mepo3g03409 220 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37 18 218 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03409 K12185 - gmx:100305851 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03409 3 44140004 44144304 Mepo3g03409 3 44140004 44144304 ECH