Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03385 ATGGCGGTAACTTCAACATCACTCGCTTCTCAACTCTCCATTGGCCTCCGTCGCCATCCCTCCCCCAAGCTCGATCATCTCACTTCTCAATCTCTCTCTTCCACCAACCCTTTCTTCGATGCCATTCATCCCAATCTTCGTTTGTCCATCTCCTCCCCCAAACCCTCCCGTACCGTTATCGCCATGGCTGGCTCTGGCAAGTTCTTTGTTGGTGGCAATTGGAAATGTAATGGAACAAAAGACTCCATCAGTAAGCTTATCTCTGACCTGAACAATGCGAAATTGGAGCCTGATGTTGATGTCGTTGTTGCACCCCCCTTTGTGTACATCGATCAGGTGAAAACCTCAATTACAGACAGGATTGAAATATCCGGTCAGAATTCTTGGGTGGGAAAAGGTGGTGCTTTCACCGGAGAAATCAGTGTGGAACAACTGAAAGATCTTGGATGCAAGTGGGTTATTCTTGGGCATTCTGAGCGAAGGCATGTTATTGGAGAAAAAGATGAGTTTATAGGAAAGAAAGCTGCATATGCTTTGAGCGAGGGTCTTGGAGTGATTGCATGCATTGGTGAATTGTTGGAAGAAAGGGAAGCTGGGAAAACTTTTGATGTCTGTTTCCAGCAATTGAAGGCTTATGCAGATGTGGTGCCTAGTTGGGATAACATTGTTATTGCATATGAACCTGTATGGGCCATCGGGACCGGCAAAGTGGCCTCTCCCGAGCAAGCTCAGGAAGTACACGTAGCTCTTCGAGACTGGCTTAAAAATAATGTCTCAGCTGAAGTCGCATCTAAAACACGTATCATTTATGGAGGATCTGTTAATGGAGGCAACAGTGCTGATCTTGCAAAGAAAGAAGATATTGATGGATTTCTTGTTGGAGGTGCTTCATTAAAGGGTCCTGAGTTTGCCACCATTGTCAATTCAGTCACATCCAAGAAAGTCACGGCTTGA 954 0.457 MAVTSTSLASQLSIGLRRHPSPKLDHLTSQSLSSTNPFFDAIHPNLRLSISSPKPSRTVIAMAGSGKFFVGGNWKCNGTKDSISKLISDLNNAKLEPDVDVVVAPPFVYIDQVKTSITDRIEISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLGVIACIGELLEEREAGKTFDVCFQQLKAYADVVPSWDNIVIAYEPVWAIGTGKVASPEQAQEVHVALRDWLKNNVSAEVASKTRIIYGGSVNGGNSADLAKKEDIDGFLVGGASLKGPEFATIVNSVTSKKVTA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03385 317 CDD TIM 68 308 IPR000652 GO:0004807
Mepo3g03385 317 Gene3D Aldolase class I 50 316 IPR013785 -
Mepo3g03385 317 FunFam Triosephosphate isomerase 62 311 - -
Mepo3g03385 317 ProSitePatterns Triosephosphate isomerase active site. 225 235 IPR020861 GO:0004807
Mepo3g03385 317 PANTHER TRIOSEPHOSPHATE ISOMERASE 63 309 IPR000652 GO:0004807
Mepo3g03385 317 ProSiteProfiles Triosephosphate isomerase (TIM) family profile. 67 309 IPR000652 GO:0004807
Mepo3g03385 317 Pfam Triosephosphate isomerase 69 309 IPR000652 GO:0004807
Mepo3g03385 317 NCBIfam triose-phosphate isomerase 69 299 IPR000652 GO:0004807
Mepo3g03385 317 SUPERFAMILY Triosephosphate isomerase (TIM) 65 310 IPR035990 GO:0004807
Mepo3g03385 317 Hamap Triosephosphate isomerase [tpiA]. 66 309 IPR022896 GO:0004807|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03385 Mepo-Chr3 43917187 43921115 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03385 K01803 - gmx:100799358 526.939