Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03320 ATGATAAATACAACAACAAACGGTAACATGACGGCGGCGTCATCTTCATCGGGTTCCACAACAACTACACAGTCACAACAACAACAACAACAAGGTCTCAAAACCTATTTCAAAACCCCTGAAGGAAGATATAAACTTCAATTCGATAAAACTCATCCTTCTGGTCTTCTTCAATTCAATCATGGCAAAACCGTTTCTATGGTAACCCTAGCACATCTTAAGGAGAAGCCGGCGCCTTCAACTCCGACTGCATCGTCTTCGAGTTTTAGTGCGAGCAGTGGAGTACGGTCAGCCGCGGCTAGATTGTTAGGAGGAAGTAATGGAAACCGGGCGCTCAGTTTTGTTGGTGGAAATGGTAGTAGCAAAAGCAATGGTGGAGCCAGTAGGATTGGTTCGATTGGTTCGTCGAGTTTGAGTAGTTCGGTGTCTAATCCAAATTTTGATGGGAAAGGTTCTTACTTGGTGTTCAATGCTGGGGATGCGATTTTGATAAGTGATTTGAATTCTCAAGATAAGGACCCCATAAAGTCTATCCACTTCAGTAATTCGAATCCTGTGTGTCATGCATTTGATCAGGATGCTAAGGACGGGCATGATTTACTCATAGGGTTGTTCTCTGGCGATGTCTACTCAGTGTCACTGCGACAGCAATTACAGGATGTTGGTAAAAAGATTGTTGGGGCCCACCATTACAACAAAGATGGTATTCTCAATAACAGTCGTTGTACATGTATTTCTTGGGTGCCTGGAGGTGATGGTGCTTTTGTTGTTGCTCATGCTGATGGGAATTTGTACATATATGAAAAGAATAAAGATGGTGCCGGCGAGTCATCATTCCCAATTCTTAAAGATCAAACTCAGTTTTCTGTTGCTCATGCACGGTACAGTAAGAGTAATCCAATAGCCAGATGGCATATCTGCCAGGGTTCGATTAACAGTATTTCTTTCTCAGCGGATGGTGCATACATGGCAACTGTTGGACGAGATGGTTACTTGCGAGTGTTCGATTATACAAAAGAACACCTTGTATGCGGTGGGAAAAGTTATTATGGTGGTTTATTATGTTGTGCTTGGAGCATGGATGGAAAGTATGTTTTGACGGGAGGGGAAGACGATTTAGTTCAAGTTTGGAGCATGGAAGATCGCAAAGTTGTTGCATGGGGTGAGGGACATAACTCATGGGTCAGTGGAGTGGCTTTTGATTCATATTGGTCATCACCAAATTCAAATGACAATGGAGAGACAATTACGTATCGATTTGGTTCAGTCGGTCAGGATACTCAATTGCTTCTATGGGAACTGGAAATGGACGAGATTGTAGTGCCCTTGAGGCGAGGTCCCCCTGGTGGATCCCCAACTTTTGGATCCCCAACTTTTAGTGCTGGAAGCCAGTCATCGCATTGGGACAATGCTGTCCCGTTGGGTACCTTACAGCCTGCTCCCAGTATGCGGGATGTTCCGAAAATCTCTCCACTGGTAGCTCATCGTGTGCATACTGAGCCTCTTTCTAGCTTGATATTTACTCAAGAATCTGTACTCACAGCCTGCCGGGAGGGGCACATCAAAATCTGGACGAGACCTGGCGTAGCTGAGAGCCAGCCAAGCAACTCCGAAACCTTGTTAGCAACTAGTCTCAAGGAGAAGCCTTCACTTTCTAGCAAGATCAGCAATTCTATCTACAAACAATAA 1689 0.4458 MINTTTNGNMTAASSSSGSTTTTQSQQQQQQGLKTYFKTPEGRYKLQFDKTHPSGLLQFNHGKTVSMVTLAHLKEKPAPSTPTASSSSFSASSGVRSAAARLLGGSNGNRALSFVGGNGSSKSNGGASRIGSIGSSSLSSSVSNPNFDGKGSYLVFNAGDAILISDLNSQDKDPIKSIHFSNSNPVCHAFDQDAKDGHDLLIGLFSGDVYSVSLRQQLQDVGKKIVGAHHYNKDGILNNSRCTCISWVPGGDGAFVVAHADGNLYIYEKNKDGAGESSFPILKDQTQFSVAHARYSKSNPIARWHICQGSINSISFSADGAYMATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYVLTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVGQDTQLLLWELEMDEIVVPLRRGPPGGSPTFGSPTFSAGSQSSHWDNAVPLGTLQPAPSMRDVPKISPLVAHRVHTEPLSSLIFTQESVLTACREGHIKIWTRPGVAESQPSNSETLLATSLKEKPSLSSKISNSIYKQ 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03320 562 MobiDBLite consensus disorder prediction 529 562 - -
Mepo3g03320 562 Gene3D - 21 533 IPR015943 GO:0005515
Mepo3g03320 562 SUPERFAMILY WD40 repeat-like 153 525 IPR036322 GO:0005515
Mepo3g03320 562 MobiDBLite consensus disorder prediction 1 33 - -
Mepo3g03320 562 ProSiteProfiles Trp-Asp (WD) repeats profile. 346 387 IPR001680 GO:0005515
Mepo3g03320 562 Pfam WD domain, G-beta repeat 353 378 IPR001680 GO:0005515
Mepo3g03320 562 Pfam WD domain, G-beta repeat 308 336 IPR001680 GO:0005515
Mepo3g03320 562 PANTHER WD REPEAT PROTEIN 16 540 - -
Mepo3g03320 562 SMART WD40_4 230 268 IPR001680 GO:0005515
Mepo3g03320 562 SMART WD40_4 381 433 IPR001680 GO:0005515
Mepo3g03320 562 SMART WD40_4 488 525 IPR001680 GO:0005515
Mepo3g03320 562 SMART WD40_4 339 378 IPR001680 GO:0005515
Mepo3g03320 562 SMART WD40_4 297 336 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03320 313 440 Miscellaneous Gene Families AT5G08390 21.094 6.21e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03320 K24741 - gmx:100782580 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03320 3 43232024 43239000 Mepo3g03320 3 43232024 43239000 ECH