Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03286 ATGAGAGATTTTGTGATCCTCGGTTCGTCCATCATCACTCCACGTTCATTCTCATCTTCCACTCCTCAACACCGCCACACCATAATCAAATCCCACAAATCCTCTCTTCCAAACCCCTCTCCACGGAACAATTCTACTACCCTTCTTCAAACCCCTCTCATTCTCAAAGAATTTGAAACTGTCCTACACGGCGACCTTGATTCCGATGTGGATGTTGAGCTCTTGGCCAATGCGGTTCTGATTGGTATCCAAGACAGAAATGTTCGGACTGTGATTGAAAGTTTGAATAAAGTGAAGGAGGGTCTTGCCGAGATTTCTCTCTCTGCTCATCTTGATGCCTCTGCCATTGCTAATGAGTGTTGCCATATGGTTACTTGTGGTCATATTGAAGAAGCTGTTGAATTGATGGAGGTTCTCTCACGTTTCCAGTTATCAATTGCAAAACTTGTTCGGTCATCTGACATTATAAAAAGATGTATTCTTAGTCGTAAACCAACTTTAGCTGTGAGGTATGCGTCACTTCTTCCACAAGCACCTATATTATTTTGTAGCATCATATCTGAATTTGGCAAAAGGAGGGATTTGGTTTCTGCTCTAAAAGCTTACGAATCATTGAAAAAGAACTTGAAAAGTCCCAATATGTACATATACCGGGCAATAATTGACGCTTGTGGTCTCTGTGGCGATTTCATGAAATCTAGGTACATATATGAGGATTTGCTTAATCAGAAAATCACTCCAAATATATATGTGTTCAACAGTCACATGAATGCGAATGTCCATGATCTCAGCTACTCGTTAAATCTATATCGGAATATGCAGAAGCTAGGCCTGAAACCCGATATGGCATCCTATAACATCCTACTGAAAGCTTGCTGTGTTGCTGGAAGAGTTGACCTGGCTCAAGATATGTATAGGGAACTTAAGCATTTGGAATCAGTGGGCGAGCTGAAATTAGATGTTTTCACCTACAGCACAATTATAAAGGTCTTTGCAGATGCAAAATTGTGGCAAATGGCTCTAAAAATCAAGCGTGACATGCTGTCTGCTGGTGTTTCTCTTAATACTGTTGCGTGGTCATCATTAATCAATGCCTGTGCACATGCAGGGCTTGTAGAGCAGGCAATTCAGTTATTTGAAGAAATGCTTTTGGCTGGCTGTGAACCAAATACACAGTGTTTCAACATAATTTTACATGCATGTGTTGAAGGTCGCCAGTATGACAGGGCTTTTCGCTTTTTCCACTCATGGAAGGGAAGTAAGATGTTAGTGCCCTTACATGAAAGCTGCAATAGCAATTCAGAGCAGGGAGGCATGCATAATGTTACCACAATGCCAACCGGCATTTCTAGTTCACATATCTTGACCTTTACCGAGAGGTTCCCTTTCACACCCACTACAACAACATACAATATTTTACTGAAGGCCTGTGGTACTAATTACTATCTTGCAAAAGCGTTAATCAACGAGATGAGAGCAATGGGTCTTTCCCCGAATCAAATAAGCTGGTCAATTTTGATAAATATATGTGGCGCATCAGAAAATGTGGATGGTGCCATTGAGATTTTGAGAACCATGGTTGATGCTGGAATTAAACCGGATGTTATTTCATATACAACAGCCATTAAGGTTTGCGTCGAAAGTAAGAATTTTACGCAGGCATTAGCATTATATAAAGAAATGAAAAGCTATGGGACACATCCAAATTTGGTGACATATAATACACTTCTAAGGGCACGCAGTAAATACGGATCCTTACGTGAAGTGCAACAGTGCCTAGCTATATATCAAGATATGCGAAAGGCAGGGTACAAACCAAATGACTACTATCTTGAGATGCTGATTGAGGAGTGGTGTGAAGGAGTAATACAAGACAACGAAGAGTACGGAGGAGAATTTTCTTCCAGCAAGAAATCTGAAATAGAGAGACCTCAAAGTTTACTTCTTGAAAAAATTGCGTCACACCTGTTAAAGCGGGTAGCTGACATCTTGGCAATTGATGTTCAAGGGCTCACAAAGGTTGAAGCCCGCCTGGTGATTCTCGCAGTTCTTCGAATGATCAAAGAGAACTACGCTATTGGGCATTCAGTGAAGGATGACATCTTGATCATCATAGGAGCTACCAGAGAAGATGAAAGTCCATCCAAAGAGATATTAGTTGTGCAAGAGGCTATGGTAAAACTTCTTACAAATGAACTGGGGCTCGAGGCTCTTCCAGCCACAACCAGATCCGAACCTAGTCACACACCAAAGTTACAAAACCCCGAATTTTCAAATCTCACCATAGAAGCACTCCCAGGAGAGAATGCATTACCCACATCAATGGGGTTTCTCACAAGGAGACCTGCAGTTCTACAAAGATTGAAGGTCACCAAAAAATCATTACACCGTTGGTTGCAGAGGAAGTCAAATGTAAAATAG 2421 0.4131 MRDFVILGSSIITPRSFSSSTPQHRHTIIKSHKSSLPNPSPRNNSTTLLQTPLILKEFETVLHGDLDSDVDVELLANAVLIGIQDRNVRTVIESLNKVKEGLAEISLSAHLDASAIANECCHMVTCGHIEEAVELMEVLSRFQLSIAKLVRSSDIIKRCILSRKPTLAVRYASLLPQAPILFCSIISEFGKRRDLVSALKAYESLKKNLKSPNMYIYRAIIDACGLCGDFMKSRYIYEDLLNQKITPNIYVFNSHMNANVHDLSYSLNLYRNMQKLGLKPDMASYNILLKACCVAGRVDLAQDMYRELKHLESVGELKLDVFTYSTIIKVFADAKLWQMALKIKRDMLSAGVSLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEGRQYDRAFRFFHSWKGSKMLVPLHESCNSNSEQGGMHNVTTMPTGISSSHILTFTERFPFTPTTTTYNILLKACGTNYYLAKALINEMRAMGLSPNQISWSILINICGASENVDGAIEILRTMVDAGIKPDVISYTTAIKVCVESKNFTQALALYKEMKSYGTHPNLVTYNTLLRARSKYGSLREVQQCLAIYQDMRKAGYKPNDYYLEMLIEEWCEGVIQDNEEYGGEFSSSKKSEIERPQSLLLEKIASHLLKRVADILAIDVQGLTKVEARLVILAVLRMIKENYAIGHSVKDDILIIIGATREDESPSKEILVVQEAMVKLLTNELGLEALPATTRSEPSHTPKLQNPEFSNLTIEALPGENALPTSMGFLTRRPAVLQRLKVTKKSLHRWLQRKSNVK 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03286 806 MobiDBLite consensus disorder prediction 16 44 - -
Mepo3g03286 806 Pfam Pentatricopeptide repeat domain 469 511 IPR002885 -
Mepo3g03286 806 Pfam Pentatricopeptide repeat domain 522 579 IPR002885 -
Mepo3g03286 806 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 534 568 IPR002885 -
Mepo3g03286 806 Gene3D Tetratricopeptide repeat domain 181 312 IPR011990 GO:0005515
Mepo3g03286 806 Gene3D Tetratricopeptide repeat domain 453 647 IPR011990 GO:0005515
Mepo3g03286 806 Gene3D Tetratricopeptide repeat domain 313 452 IPR011990 GO:0005515
Mepo3g03286 806 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 281 311 IPR002885 -
Mepo3g03286 806 PANTHER ATPASE EXPRESSION PROTEIN 3 317 615 - -
Mepo3g03286 806 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 320 354 IPR002885 -
Mepo3g03286 806 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 569 606 IPR002885 -
Mepo3g03286 806 Pfam PPR repeat 277 308 IPR002885 -
Mepo3g03286 806 Pfam PPR repeat family 355 401 IPR002885 -
Mepo3g03286 806 NCBIfam pentatricopeptide repeat 501 535 IPR002885 -
Mepo3g03286 806 NCBIfam pentatricopeptide repeat 322 355 IPR002885 -
Mepo3g03286 806 NCBIfam pentatricopeptide repeat 215 249 IPR002885 -
Mepo3g03286 806 NCBIfam pentatricopeptide repeat 357 391 IPR002885 -
Mepo3g03286 806 NCBIfam pentatricopeptide repeat 571 607 IPR002885 -
Mepo3g03286 806 NCBIfam pentatricopeptide repeat 536 569 IPR002885 -
Mepo3g03286 806 NCBIfam pentatricopeptide repeat 284 309 IPR002885 -
Mepo3g03286 806 Pfam PPR repeat 322 352 IPR002885 -
Mepo3g03286 806 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 499 533 IPR002885 -
Mepo3g03286 806 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 355 389 IPR002885 -
Mepo3g03286 806 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 213 247 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03286 180 648 Glycosyltransferase AT1G05670 22.407 1.39e-29 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03286 - - gmx:100794606 1168.3