Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03208 ATGTCTGGTGAATTCCTTCAAGAAAATTCCATTGTGGTGGGGTGTGGAGCAGTGGGCTTGGATTTATTGGCCACTGTTGCTGCTTTTCCTAAGCCAGATCAAAAAATCAGAAGCACTTCCTTCAAGACTCAAGGAGGAGGCAACACAGGCAACGCCTTAACATGCGCAGCTCGCTTAGGGCTCAAGCCAAGGATCATCTCCAAGGTTGCAGACGACACTCAGGGAAGGAGCATATTAGATGAATTTCAAGCTGATGGTGTAGATACCTCCTTTATAGTGGTATCTAAGGAAGGAACTTCACCATTTACATATATCATTGTTGACAACCAAACCAAGTCACGTACTTGTCTACATACCCCAGGATTTCCTCCAATGAAACCAGACGACCTTCCTGAATCAAGTTTATTATCTGCAATGAATGGAGCGAGAATTGCTTATCTTGATGGGAGATTGCATGAAACTGCTCTAGTTGTTGCACACGAGGCAGTTAAGAAGAATATACCTATCTTAATGGATGCAGAAAGGCTAAGAGAAGGGTTGGATGATCTCCTGAAAGTAGTTGATTATGTCGTATGTGCTGCACAGTTTCCGCAGGCATGGACAGAGGCAGCAACTATTCCAAAAGCACTTGTTTCTATGCTTCTAAGCTTGCCCAAAATCAAATTTGTGATTGTAACTTTGGGAAAAAATGGTTGCATAATGCTTGAGAGAAGTGCTAATGAGGTTCCATCCACAGAAGAAATGGATGTTGACAAATTGCTCGAATCTCTGGAAACAAAAAAGAATGGGAGCATATGCATCCCAACGTGCATATCATCGTCGGTGACAAAATTGCGAGCAGAAGGTATAGGAACAATTTGTGGTAGGCTATACATTGGAACAGCTGAAAACATACCACCATCAGAGCTTATTGATACTACAGGTGCCGGTGATGCATTCACCGGAGCTATTATCTACGCTATCTGCGCCAACTTTGCACCAGAGAAAATGCTATGCTTTGCTGCTAATGTGGCAGCTGCCAAGTGCAGAGCACTAGGGGCGCGGAGTGGTCTTCCTCACCAAACTGATCAGCGCCTCGCGTCTTTCATGCAGTAG 1095 0.4429 MSGEFLQENSIVVGCGAVGLDLLATVAAFPKPDQKIRSTSFKTQGGGNTGNALTCAARLGLKPRIISKVADDTQGRSILDEFQADGVDTSFIVVSKEGTSPFTYIIVDNQTKSRTCLHTPGFPPMKPDDLPESSLLSAMNGARIAYLDGRLHETALVVAHEAVKKNIPILMDAERLREGLDDLLKVVDYVVCAAQFPQAWTEAATIPKALVSMLLSLPKIKFVIVTLGKNGCIMLERSANEVPSTEEMDVDKLLESLETKKNGSICIPTCISSSVTKLRAEGIGTICGRLYIGTAENIPPSELIDTTGAGDAFTGAIIYAICANFAPEKMLCFAANVAAAKCRALGARSGLPHQTDQRLASFMQ 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03208 364 Gene3D - 11 349 IPR029056 -
Mepo3g03208 364 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 5 364 - -
Mepo3g03208 364 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 305 318 IPR002173 GO:0016301
Mepo3g03208 364 CDD ribokinase_group_B 11 353 - -
Mepo3g03208 364 Pfam pfkB family carbohydrate kinase 296 353 IPR011611 -
Mepo3g03208 364 Pfam pfkB family carbohydrate kinase 16 243 IPR011611 -
Mepo3g03208 364 PRINTS Ribokinase signature 41 60 IPR002139 GO:0016301
Mepo3g03208 364 PRINTS Ribokinase signature 223 234 IPR002139 GO:0016301
Mepo3g03208 364 PRINTS Ribokinase signature 14 35 IPR002139 GO:0016301
Mepo3g03208 364 SUPERFAMILY Ribokinase-like 12 354 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03208 Mepo-Chr3 42187476 42191105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03208 - - ccaj:109795876 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03208 3 42187476 42191105 Mepo3g03208 3 42187476 42191105 ECH
Mepo3g03208 3 42187476 42191105 Mepo4g02718 4 35944579 35950222 PCT