Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03203 ATGACGAGAATTCATCGGAATCGTGATCGCACCGGTAATTCTAACGGCAGCAATGTCTTTAATTTGCTTGCACGGAGAGAGATTTCACCGAGAACAAAACATGTAGCAAGAGATGCAAAGCGTGGCCTATTGTCATGGGTTGAGGCTGATTCACTGCGACATTTGTCCGCCAAGTATTGTTCTTTATTACCTGCGCCAAGGTCTACTATTGCAGCAGCGTTTAGTCCAGATGGAAAAGTTCTTGCATCCACACATGGTGACCACACAGTAAAGATAATTGACTGTGAAACTGGACGTTGCTTAAAGGTGTTAATTGGCCATATGAGGACGCCTTGGGTGGTTAGGTTCCATCCATTGCATCCACAAATACTTGCTAGTGGGAGCTTGGATCAAGAAGTTCGATTATGGGATGCTAACACATCCGAGTGCATAACATCTCACCACTTCTATCGACCAATTGCATCCATTGCTTTTCATGCCAAAGGGGAAATAATTGCCGTTGCGTCAGGCCACAAGCTGTACATATGGCACTACGACAAGAAAGGCGAAGCATCCTACTCCCCAATTTTTGTGTTAAAGACAAGGCGATCTCTACGGGCTGTTCATTTTCACCCTCATGCTGCGCCATATCTTTTAACGGCCGAGGTCAATGATCTCGACTCTTCAGATTCCTCAATGACAGAGGCAACATCCATTGGTTACTTACAATATCCTCCACCTGCTGTTTTTGTCACAAATGTTCATCCTACAGAACATGTTACTTTGTCCAGTGAACCACCTAATGTGTCATTGCCTTTCTTCCTCGTGCCTCCGTATACTGTTGATGAGTCGAGAGCAGAGTTGCAGCATGCTAGTCATGACGCTGGTTCAGGTAGAATACAGATTGAGTCTTCTGCCGTGGCTCAGTTTCAAACGGACACAAATGCAACAGAACAACATGATACTACAGTGTCTCCCATGGATACAGTTTCGGAGACTCCCACTAACTCTCAAGCTGGTACAGAATATCCTGCGCATACTGCTTTCTCTAATGGAATGGGAATTGGCATCGGCAACCTCACAATGGATGGTATGGAGACTGATGAAACCACACCGGTTGAAGGAAGTCAACACAGAAACCCTACCAATGCAAGTTCTCTCAATGGTATGTTGCATGGATTATCTAGACAAACCGCAAATCATGGGGTTCATCCAGAGGATGGTCAATTTCATCCGTTTGTTTCTTCAAGAGACCCAAGTGGATGGGAATTACCTTTTCTACAAGGATGGATGATGGGTCAAAGCAAAGCTGGTCTCCCCTCAATGCTACCTCACATGGGTGTTAGTCATGATACTCTAGCTCAACAGATTAGTTCTAGTGTAACAGCTGATACTCTTCCCTCTTCTAATGCTGATGTAGCAGTGCCATCTTCAGCAATGTCTGGCAGCATTAACATACCCGGATCTTCTGTAAGATCAGGTTCACGTAGTCATTTTTCACACTCACGGACACCCGTATCTGAATCTGGAAATCTTGCTGCTTCTATTAATACTCCACATGATGGATCTGACATCCAAACCATCATGAGTCGAATCCAGTCAGAACTTGCAACGTCTGTGGCCGCAGCGGCAGCTACCGAGTTGCCTTGTACCGTGAAGTTAAGGGTGTGGTCTCATGACATAAAAAATCCCTGTTCCCCACTAAATGCTGACAGATGTCGTCTAATTATACCTCATGCCGTCCTCTGCAGTGAAATGGGTGCTCACTTTTCACCATGCGGTAGATTTTTAGCTGCCTGTGTTGCATGTATGCTTCCACATATAGAAGCTGATCCTGGATTACAAACTCCAGTACATCAAGAGTCTGGTATTGCAACATCACCAACTCGGCATCCAATATCAGCACACCAAGTTATGTATGAGCTTCGGATATATTCCCTTGAGGAGGCAACATTTGGGTTGGTGCTTGCGTCTCGGGCAATTAGAGCAGCTCACTGTCTCACTTCAATTCAGTTCTCACCTACATCTGAGCACATACTCCTTGCCTATGGTCGACGTCATGGTTCTCTTCTTAAAAGCATTGTCATTGATGGAGAAACAACATTACCTATATATACAGTATTAGAGGTATATAGAGTTTCAGATATGGAACTTGTTAGGGTGCTTCCGAGTGCTGAAGATGAGGTCAATGTGGCATGCTTTCATCCTTTTCCCGGGGGCGGGCTAGTTTATGGAACAAAGGAAGGAAAGCTTAGGATCCTCCACTATGATGGTGCTCACCCGGTGAGTGGGACTGGACCAAGTTACTTTCCTGAGGAGACCATTGTTGGAGTCAGTCAGTGA 2322 0.4526 MTRIHRNRDRTGNSNGSNVFNLLARREISPRTKHVARDAKRGLLSWVEADSLRHLSAKYCSLLPAPRSTIAAAFSPDGKVLASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPLHPQILASGSLDQEVRLWDANTSECITSHHFYRPIASIAFHAKGEIIAVASGHKLYIWHYDKKGEASYSPIFVLKTRRSLRAVHFHPHAAPYLLTAEVNDLDSSDSSMTEATSIGYLQYPPPAVFVTNVHPTEHVTLSSEPPNVSLPFFLVPPYTVDESRAELQHASHDAGSGRIQIESSAVAQFQTDTNATEQHDTTVSPMDTVSETPTNSQAGTEYPAHTAFSNGMGIGIGNLTMDGMETDETTPVEGSQHRNPTNASSLNGMLHGLSRQTANHGVHPEDGQFHPFVSSRDPSGWELPFLQGWMMGQSKAGLPSMLPHMGVSHDTLAQQISSSVTADTLPSSNADVAVPSSAMSGSINIPGSSVRSGSRSHFSHSRTPVSESGNLAASINTPHDGSDIQTIMSRIQSELATSVAAAAATELPCTVKLRVWSHDIKNPCSPLNADRCRLIIPHAVLCSEMGAHFSPCGRFLAACVACMLPHIEADPGLQTPVHQESGIATSPTRHPISAHQVMYELRIYSLEEATFGLVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTLPIYTVLEVYRVSDMELVRVLPSAEDEVNVACFHPFPGGGLVYGTKEGKLRILHYDGAHPVSGTGPSYFPEETIVGVSQ 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03203 773 SMART WD40_4 97 137 IPR001680 GO:0005515
Mepo3g03203 773 SMART WD40_4 708 748 IPR001680 GO:0005515
Mepo3g03203 773 SMART WD40_4 140 177 IPR001680 GO:0005515
Mepo3g03203 773 SMART WD40_4 56 94 IPR001680 GO:0005515
Mepo3g03203 773 MobiDBLite consensus disorder prediction 471 513 - -
Mepo3g03203 773 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 63 750 IPR011047 -
Mepo3g03203 773 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 104 142 - -
Mepo3g03203 773 MobiDBLite consensus disorder prediction 307 343 - -
Mepo3g03203 773 Pfam WD domain, G-beta repeat 98 137 IPR001680 GO:0005515
Mepo3g03203 773 Pfam WD domain, G-beta repeat 71 94 IPR001680 GO:0005515
Mepo3g03203 773 MobiDBLite consensus disorder prediction 307 338 - -
Mepo3g03203 773 ProSiteProfiles Trp-Asp (WD) repeats profile. 104 146 IPR001680 GO:0005515
Mepo3g03203 773 ProSitePatterns Trp-Asp (WD) repeats signature. 124 138 IPR019775 -
Mepo3g03203 773 Gene3D - 42 226 IPR015943 GO:0005515
Mepo3g03203 773 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 17 769 - -
Mepo3g03203 773 FunFam Activating molecule in BECN1-regulated autophagy protein 51 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03203 Mepo-Chr3 42156781 42162585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03203 71 239 Miscellaneous Gene Families AT5G08390 24.176 9.41e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03203 K17985 - gmx:100817857 1288.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03203 3 42156781 42162585 Mepo3g03203 3 42156781 42162585 ECH