Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03190 ATGGATGATTCAGGTGAGATATACGACGGCGTAAGAGCCGAATTCCCTCTTTCGTTCGGTAAACAATCGAAATCTCAAACCCCTCTCGAAACCATTCACAAAGCCACTCGTCGTCCTTCTGTCCCCACTTCCAATTCCAAAACCCCTAACGACGATGATTTTCCTTCCAAGGAATGGCTTCATTCCATTCGTCCACCCAAAAACCCTAACCCTCCGTCTCCTCCTCAAGACGACTATTCTCCCCTCGTCGGACCACCTCCACCGCCACCACGTCATGAAGCCGACGAGGAGGAGGATGATGACGACGCTGAGATGATTGGTCCTCCACCACCGCCACCTGGTTCCAATTTTGATGATTCTGAAGACGAAGACAACCATTCTGATCAAGACCAACTTGGAAACCGCTTTCGTATTCCTCTTAGTAACGAGATTGTCCTCAAAGGCCATACAAAGGTTGTGTCCGCTCTTGCTGTGGATCACACGGGGTCCAGAGTACTATCTGGAAGTTATGACTATATGGTTCGTATGTATGACTTTCAAGGAATGAATTCTCGTCTGCAATCGTTTCGACAAATCGAGCCGTCTGAAGGCCATCAAATTCGCAATTTAAGCTGGAGTCCAACTGCAGATCGTTTTTTGTGTGTGACGGGATCAGCTCAAGCTAAGATTTACGATCGTGATGGCCTCACTCTTGGTGAGTTTGTAAAGGGAGACATGTATATTCGTGATCTAAAGAATACCAAGGGTCATATAACTGGATTGACATGTGGTGAGTGGCACCCAAAAACTAAGGAGACCATTTTGACATCATCAGAAGATGGGTCACTCCGCATATGGGATGTAAATGACTTCACAACTCAGAAGCAGGTCATTAAACCAAAGCTTGCGAGACCTGGAAGAGTTCCTGTCACCACATGTGCATGGGATCATGATGGTAAATGCATTGCTGGTGGTATAGGAGATGGTTCTATACAGGTTTGGAGTATTAAACCCGGATGGGGGAGTAGGCCTGATATACATTTTGAAAAATGTCACGAAGATGATATTACTAGTCTGAAATTTTCTGCTGATGGGAGAATCTTATTGTCAAGGAGCTTTGATGATTCATTGAAGGTTTGGGATATGCGCAAAACAAAAGAAGCCTTGAAGGTATTTGAAGAACTGCCAAACCACTATGGTCAAACAAATGTCAGCTTCAGTCCTGATGAGCAACTATTTTTTACTGGAACATCTGTAGAAAAGGATAGCTCAACAGGAGGTTTACTATGCTTCTTTGATAGAGTAAATCTCGAGCTTGTTTCAAAAGTTGGCATATCCCCCACTTGCAGTGTTGTTCAGTGTTCTTGGCATCCTAAACTGAATCAGATCTTCGCATCTGTTGGCGATAAAAGCCAAGGAGGGACTCACATACTATATGATCCAACCATCAGTGAGAGAGGAGCTCTTGTTTGTGTTGCACGTGCACCAAGGAAAAAATCAGTTGATGATTTTGTAGCAAATCCTGTCATACACAATCCTCATGCTTTACCTCTATTTAGAGATCAGCCAAGCCGCAAGCGTCAGCGAGAGAAGGTATTAAAGGATCCATTGAAGTCCCATAAGCCTGAAATGCCCATGACAGGACCTGGCTTTGGTGGACGAGTTGGTACAAGTCAAGGAAGTTTACTGACCCAGTATCTACTAAAGAAAGGGGGCATGATTAAGGAGACGTGGATGGATGAAGATCCAAGGGAAGCTATCCTAAAATATGCTGATGTTGCAGCAAAGGAACCAAAGTTCATAGCTCCGGCATATGCTGAAACTCAACCTGAGACTTTGTTTGCGAAGTCAGATTCTGAGGATGAAGAGAAATGA 1854 0.4444 MDDSGEIYDGVRAEFPLSFGKQSKSQTPLETIHKATRRPSVPTSNSKTPNDDDFPSKEWLHSIRPPKNPNPPSPPQDDYSPLVGPPPPPPRHEADEEEDDDDAEMIGPPPPPPGSNFDDSEDEDNHSDQDQLGNRFRIPLSNEIVLKGHTKVVSALAVDHTGSRVLSGSYDYMVRMYDFQGMNSRLQSFRQIEPSEGHQIRNLSWSPTADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHITGLTCGEWHPKTKETILTSSEDGSLRIWDVNDFTTQKQVIKPKLARPGRVPVTTCAWDHDGKCIAGGIGDGSIQVWSIKPGWGSRPDIHFEKCHEDDITSLKFSADGRILLSRSFDDSLKVWDMRKTKEALKVFEELPNHYGQTNVSFSPDEQLFFTGTSVEKDSSTGGLLCFFDRVNLELVSKVGISPTCSVVQCSWHPKLNQIFASVGDKSQGGTHILYDPTISERGALVCVARAPRKKSVDDFVANPVIHNPHALPLFRDQPSRKRQREKVLKDPLKSHKPEMPMTGPGFGGRVGTSQGSLLTQYLLKKGGMIKETWMDEDPREAILKYADVAAKEPKFIAPAYAETQPETLFAKSDSEDEEK 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03190 617 MobiDBLite consensus disorder prediction 1 133 - -
Mepo3g03190 617 SUPERFAMILY WD40 repeat-like 122 462 IPR036322 GO:0005515
Mepo3g03190 617 PANTHER GASTRULATION DEFECTIVE PROTEIN 1-RELATED 9 616 - -
Mepo3g03190 617 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 342 376 - -
Mepo3g03190 617 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 146 180 - -
Mepo3g03190 617 FunFam WD repeat-containing protein 70 235 477 - -
Mepo3g03190 617 ProSiteProfiles Trp-Asp (WD) repeats profile. 146 187 IPR001680 GO:0005515
Mepo3g03190 617 SMART WD40_4 139 178 IPR001680 GO:0005515
Mepo3g03190 617 SMART WD40_4 237 280 IPR001680 GO:0005515
Mepo3g03190 617 SMART WD40_4 286 328 IPR001680 GO:0005515
Mepo3g03190 617 SMART WD40_4 334 374 IPR001680 GO:0005515
Mepo3g03190 617 SMART WD40_4 185 225 IPR001680 GO:0005515
Mepo3g03190 617 FunFam Nucleotide binding protein 86 234 - -
Mepo3g03190 617 ProSitePatterns Trp-Asp (WD) repeats signature. 267 281 IPR019775 -
Mepo3g03190 617 ProSiteProfiles Trp-Asp (WD) repeats profile. 247 289 IPR001680 GO:0005515
Mepo3g03190 617 MobiDBLite consensus disorder prediction 526 547 - -
Mepo3g03190 617 Pfam WD domain, G-beta repeat 245 280 IPR001680 GO:0005515
Mepo3g03190 617 Pfam WD domain, G-beta repeat 302 328 IPR001680 GO:0005515
Mepo3g03190 617 Pfam WD domain, G-beta repeat 144 178 IPR001680 GO:0005515
Mepo3g03190 617 Pfam WD domain, G-beta repeat 343 374 IPR001680 GO:0005515
Mepo3g03190 617 PRINTS G protein beta WD-40 repeat signature 267 281 IPR020472 -
Mepo3g03190 617 PRINTS G protein beta WD-40 repeat signature 361 375 IPR020472 -
Mepo3g03190 617 PRINTS G protein beta WD-40 repeat signature 315 329 IPR020472 -
Mepo3g03190 617 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 247 282 - -
Mepo3g03190 617 Gene3D - 86 235 IPR015943 GO:0005515
Mepo3g03190 617 Gene3D - 236 475 IPR015943 GO:0005515
Mepo3g03190 617 ProSiteProfiles Trp-Asp (WD) repeats profile. 342 383 IPR001680 GO:0005515
Mepo3g03190 617 MobiDBLite consensus disorder prediction 19 50 - -
Mepo3g03190 617 MobiDBLite consensus disorder prediction 65 89 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03190 267 447 Miscellaneous Gene Families AT5G08390 25.275 1.42e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03190 K24752 - gmx:100815380 1039.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03190 3 42069308 42073628 Mepo3g03190 3 42069308 42073628 ECH