Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03185 ATGGAAGAAGGAGGAGGAAGTGAGTTGAAGCCAATGGATGCTGAGCAACTGAGAGAGCAAGGTCATAAGATGGTTGATTTCATTGCTGATTACTACAAAACCATTGAAAATTTTCCAGTTCTTAGCCAAGTTCAGCCAGGTTATCTTGGAAAGCTTCTACCAGATTCTGCTCCTACTCATCCTGAATCATTGCAACATGTTTTAAACGATGTACAGGAAAAGATACTACCAGGGGTGACACATTGGCAAAGCCCTAATTATTTTGCATATTTTCCATCCAATAGTAGCATTGCTGGTTTTTTAGGAGAGATGCTTAGTGCTGGTCTCAGCATTGTGGGTTTCAGCTGGATAAGTTCTCCTGCTGCAACTGAACTCGAAACAATTGTCCTCGACTGGCTCGCCAAGGCACTCCTTCTGCCTCATGATTTCTTTTCTACCGGGCAAGGGGGTGGAGTTATACAGGGAACAGCTAGTGAAGCTGTGGTAGTAGTGTTGGTGGCTGCCCGTGACAAGATCCTGCGGGCGGTTGGACGGAACGCTCTTCCTAAGCTTGTGACATATGCATCTGACCAAACACACTCCGCTTTACAAAAAGCTTGCCAGATAGGAGGACTTAATCCAGAGCTCTGCAGGTTGCTTAAAACCGATTCTTCCACAAATTTTGCGCTTTCCCCTGATGTACTTTCTGAAGCAATTTCAAATGACATTGCCAGTGGCCTTATACCTTTTTTCTTATGTGCTACCGTTGGTACTACTTCATCAACAGCTGTTGATCCTCTACCTGCATTGGCAAAAGTCACTAGGCCCAACAATATTTGGTTTCATGTGGATGCTGCTTATGGTGGAAGCGCTTGTATATGTCCAGAGTACCGCCACTTCATTGATGGGGTTGAAGAAGCGGATTCATTTAACATGAATGCACATAAATGGTTCCTTACTAACTTCGACTGTTCAGTGCTTTGGGTTAAGGACAGAAGTACTCTGATTCAGTCGCTGTCTACAAATCCAGAATTTCTGAAAAATAAGGCCTCTCAAGAAAACACGGTCATAGATTACAAAGACTGGCAAATTCCTCTTGGCCGTCGGTTTAGATCATTAAAATTGTGGATGGTGATGCGACTCTATGGATTGGAAGGTCTGCGAACTCACATAAGAAACCACATTGCATTGGCAGTTTATTTTGAGGAGCTTGTTGTTCAAGACACTAGATTCAAGGTTGTTGCGCCTCGAACATTCTCTTTAGTTTGTTTTCGGCTTTTGCCTCCCCCAAACTCTGAAGATAATGGCAACAAACTGAACCATGATCTACTCGACTCAGTAAATTCAACGGGAAGTGTTTTCATAACACACACGGTTCTATCAGGTGAGTACATTCTACGTTTCGCAGTAGGAGCACCGTTGACAGAAGTGAGGCATGTCAGTGCAGCGTGGCAGATTTTACAAGAAAAAGCCACTGCTCTATTAGAGAGTTTATAG 1476 0.4363 MEEGGGSELKPMDAEQLREQGHKMVDFIADYYKTIENFPVLSQVQPGYLGKLLPDSAPTHPESLQHVLNDVQEKILPGVTHWQSPNYFAYFPSNSSIAGFLGEMLSAGLSIVGFSWISSPAATELETIVLDWLAKALLLPHDFFSTGQGGGVIQGTASEAVVVVLVAARDKILRAVGRNALPKLVTYASDQTHSALQKACQIGGLNPELCRLLKTDSSTNFALSPDVLSEAISNDIASGLIPFFLCATVGTTSSTAVDPLPALAKVTRPNNIWFHVDAAYGGSACICPEYRHFIDGVEEADSFNMNAHKWFLTNFDCSVLWVKDRSTLIQSLSTNPEFLKNKASQENTVIDYKDWQIPLGRRFRSLKLWMVMRLYGLEGLRTHIRNHIALAVYFEELVVQDTRFKVVAPRTFSLVCFRLLPPPNSEDNGNKLNHDLLDSVNSTGSVFITHTVLSGEYILRFAVGAPLTEVRHVSAAWQILQEKATALLESL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03185 491 Gene3D Aspartate Aminotransferase, domain 1 386 491 IPR015422 GO:0003824
Mepo3g03185 491 CDD DOPA_deC_like 87 482 - -
Mepo3g03185 491 Gene3D - 93 385 IPR015421 GO:0003824
Mepo3g03185 491 PRINTS Aromatic-L-amino-acid decarboxylase signature 58 77 IPR010977 GO:0006520|GO:0016831
Mepo3g03185 491 PRINTS Aromatic-L-amino-acid decarboxylase signature 124 143 IPR010977 GO:0006520|GO:0016831
Mepo3g03185 491 PRINTS Aromatic-L-amino-acid decarboxylase signature 40 57 IPR010977 GO:0006520|GO:0016831
Mepo3g03185 491 PRINTS Aromatic-L-amino-acid decarboxylase signature 149 169 IPR010977 GO:0006520|GO:0016831
Mepo3g03185 491 PRINTS Aromatic-L-amino-acid decarboxylase signature 358 373 IPR010977 GO:0006520|GO:0016831
Mepo3g03185 491 PRINTS Aromatic-L-amino-acid decarboxylase signature 84 103 IPR010977 GO:0006520|GO:0016831
Mepo3g03185 491 PRINTS Aromatic-L-amino-acid decarboxylase signature 401 420 IPR010977 GO:0006520|GO:0016831
Mepo3g03185 491 PRINTS Aromatic-L-amino-acid decarboxylase signature 17 36 IPR010977 GO:0006520|GO:0016831
Mepo3g03185 491 PRINTS Aromatic-L-amino-acid decarboxylase signature 105 123 IPR010977 GO:0006520|GO:0016831
Mepo3g03185 491 PANTHER GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE 9 490 - -
Mepo3g03185 491 SUPERFAMILY PLP-dependent transferases 12 485 IPR015424 -
Mepo3g03185 491 Gene3D - 7 92 - -
Mepo3g03185 491 Pfam Pyridoxal-dependent decarboxylase conserved domain 46 419 IPR002129 GO:0016830|GO:0019752|GO:0030170
Mepo3g03185 491 FunFam Histidine decarboxylase 93 385 - -
Mepo3g03185 491 FunFam Histidine decarboxylase 12 92 - -
Mepo3g03185 491 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 302 323 IPR021115 GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03185 Mepo-Chr3 41943079 41948430 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03185 K01593 - gmx:100791074 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03185 3 41943079 41948430 Mepo3g03185 3 41943079 41948430 ECH