Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03175 ATGTTGCTAAGAAGCTCTTCAACACCAGTTCTTGGTTCTCTCCTATCTTCTTCTGGCTCTTTCACAGATAGTCCTATTCATCATCATACTCATAGTCTTCACCCTGAATCCTATCATGCACTTAAGCATCTACAACCACCAACCACTTCACTCCAACATCATCATCACAATCACAAACTCTCATGTACTTCTTCTCCAATTTCTCCTTCCATTGCTGATCTTGAAAGACAAAACAAAGGGTTTATTAGAAGAGTTCAATCTGAAGGGAACTTGGAAGACTTAGCATATGCTACTACATGTAACAACAATGAAGAGAGATTCAATTATATGGACTCTTCTTCTTCTAAGAGGTATTCAGTGAGACAAAGATGTTTGGCCCTTGAGACCATTCCATCTTTCTCTCTTTCAAAGCAAACAGGCTTGCGTGAAGAAGAAACTGATTTTGAAGATGAAGGATATGATGATGATTTCAGCAGTGTTATGAATAGTACTGGCAGTGGTGTGGTGGTGAATGATGAAGTGAAGGATAGAGTTTTCAGGGTGAGTTTTGGTGAGGAGGGAAAGGTTGGTAATAAAGAAATGTATCTTGCAAAGGGACTTGGTATTGATGTGAGTGGTGATGGCATAGGTGGTTGCAGAGGAGGGAATGGAGGTGGTGATTATAGTTCCATGGGTTCTGGAGGGAATGATGGAGATAGTAATCATGGGGTGGAAGAATATTACAAGAAAATGGTTCAGCAAAATCCAGGAAACCAATTGTTTCTGAGGAATTATGCTCAGTTTCTGTATCAGTGCAAACAAGACCGTGAAGGAGCAGAGGAATATTATTCCAGAGCCATACTAGCAGATCCAAATGATGGAGAAGTTCTGTCACAGTATGGAAAGCTAGTTTGGGAGTTACATCATGATGAAGAAAGAGCATCCAGCTATTTTGAACGAGCAGTACAAGCCTCTCCTGATGACAGTCATGTACAAGCAGCATATGCAAGTTTCCTTTGGAACACAGAGGAAGACGAGGAGGCAGGTTCCAACGACCCACAATGTTTACCTCAACATTTCCATTTTGGAGCTATGGCAACTACAGGTGCTTAG 1092 0.4121 MLLRSSSTPVLGSLLSSSGSFTDSPIHHHTHSLHPESYHALKHLQPPTTSLQHHHHNHKLSCTSSPISPSIADLERQNKGFIRRVQSEGNLEDLAYATTCNNNEERFNYMDSSSSKRYSVRQRCLALETIPSFSLSKQTGLREEETDFEDEGYDDDFSSVMNSTGSGVVVNDEVKDRVFRVSFGEEGKVGNKEMYLAKGLGIDVSGDGIGGCRGGNGGGDYSSMGSGGNDGDSNHGVEEYYKKMVQQNPGNQLFLRNYAQFLYQCKQDREGAEEYYSRAILADPNDGEVLSQYGKLVWELHHDEERASSYFERAVQASPDDSHVQAAYASFLWNTEEDEEAGSNDPQCLPQHFHFGAMATTGA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03175 363 SUPERFAMILY TPR-like 238 341 IPR011990 GO:0005515
Mepo3g03175 363 Gene3D Tetratricopeptide repeat domain 230 343 IPR011990 GO:0005515
Mepo3g03175 363 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 336 - -
Mepo3g03175 363 MobiDBLite consensus disorder prediction 47 69 - -
Mepo3g03175 363 SMART hat_new_1 302 334 IPR003107 GO:0006396
Mepo3g03175 363 SMART hat_new_1 232 264 IPR003107 GO:0006396
Mepo3g03175 363 SMART hat_new_1 267 299 IPR003107 GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03175 Mepo-Chr3 41868479 41871311 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03175 - - gmx:100788436 407.142