Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03174 ATGGCTTCATATCAGGGTTCAGTTAGTGCTGCCCAGGTTGGTTCTTACTTTGTGGGACAGTACTATCAAGTTCTGCGTCAACAGCCTGATCATGTTCATCAGTTTTACTCTGATTCGAGTTCGATGATTCGTGTTGACGGTGATTATACTGAGACTGCATCTGATGTCTTGCATATTCACAATATTGTGACGTCGCTGAATTTTTCGACGATTGAGATCAAGACGATCAATTCTCTGGACTCTTGGGATGGGGGAGTGATTGTAATGGTTACGGGTGTTGTTAAGACCAAGGATGTCAATAGGAAGCAGAAGTTTGTTCAAACTTTCTTCCTTGCTCCTCAGGAGAAGGGTTATTTTGTACTCAATGATATTTTTCAGTTTGTTGATGAAGATGTAGCGCATCCGAATCTGGGACCGGTGGCATCTGAAAGGATTGACTCACAGCCACATGTTTCTGCTTCTTTTGCTGAACCACCAGCTTCAGACTATGGTTTTGAGGAAGAAGCTAGAGACTATGTCAACTCAGTTCATATAGATGATGATCCAGTGGACAAGTATAGTCTTCCTGAGCAGCAGCAGCAGCAACTACAAGAAGATTTCGAGACTGAAGTAGTGGTAGATGAAACTCCTGTACAGGAGGCATCTCCACCAGTGCATAATGTTGCACATACTATCCGTGAAACCCCCACTGCTCCTGTGGAAGAGTCTTTTGAGGAACCTGCTAAGAAAACTTATGCATCTATTTTACGCGCCAAAGGCCAATCAGCGTTGTCGGCTGCTCCACAACATGCTCCACAACATTCCTTTAAAAGTGCTCCTCCTCCTTCAGAGTACAATCATGTGACACAGCCTGCTGTTCAGCAGTCAGTGGCGCAGCCTGCTTTCCAGCAGTCAAGCTCAGCATCTGCATATGTTTCAGAGTCTGGGCCTGAGGCAGCCGAGGAAGGCTACCGATTTGAAGAAGAAGAAGTAACATCTGTCTATGTGAGAAACTTGCCTGCTGATATTACCGAAGCTGAGATTGACCAGGAATTTAAGAATTTCGGCAGAATTAAGCCGGATGGAATATTCATAAGGGTCCGGCAGGAAATTGGAGTTTGCTATGCATTTGTGGAATTCGAAGACGTTGTTGGCACACAAAATGCGCTTCAGGCTTCTCCCATTCAACTTGCTGGGCGACCAATATACATAGAGGAGCGAAGACCAAGCACTAGCAGTGCAACTCGAGGAGGAAGAGGAAGGGGAAGAGGCAGAGGCAGTTATCCATCAGATGCTCCAAGAGGGCGTTTTGGTGGTCGTAGCTCGGGAAGGGGATATTACCAGGACACTTCAGACTACTCCAGACCAAGAGGTGACGGTTATCTTCAGCGTGGTTCACGATAG 1383 0.4613 MASYQGSVSAAQVGSYFVGQYYQVLRQQPDHVHQFYSDSSSMIRVDGDYTETASDVLHIHNIVTSLNFSTIEIKTINSLDSWDGGVIVMVTGVVKTKDVNRKQKFVQTFFLAPQEKGYFVLNDIFQFVDEDVAHPNLGPVASERIDSQPHVSASFAEPPASDYGFEEEARDYVNSVHIDDDPVDKYSLPEQQQQQLQEDFETEVVVDETPVQEASPPVHNVAHTIRETPTAPVEESFEEPAKKTYASILRAKGQSALSAAPQHAPQHSFKSAPPPSEYNHVTQPAVQQSVAQPAFQQSSSASAYVSESGPEAAEEGYRFEEEEVTSVYVRNLPADITEAEIDQEFKNFGRIKPDGIFIRVRQEIGVCYAFVEFEDVVGTQNALQASPIQLAGRPIYIEERRPSTSSATRGGRGRGRGRGSYPSDAPRGRFGGRSSGRGYYQDTSDYSRPRGDGYLQRGSR 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03174 460 CDD NTF2 9 129 IPR018222 -
Mepo3g03174 460 PANTHER RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN 9 451 IPR039539 -
Mepo3g03174 460 Gene3D - 296 454 IPR012677 -
Mepo3g03174 460 CDD RRM_SF 327 398 - -
Mepo3g03174 460 FunFam Nuclear transport factor 2 family protein 315 454 - -
Mepo3g03174 460 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 325 402 IPR000504 GO:0003723
Mepo3g03174 460 MobiDBLite consensus disorder prediction 254 293 - -
Mepo3g03174 460 SMART rrm1_1 326 398 IPR000504 GO:0003723
Mepo3g03174 460 MobiDBLite consensus disorder prediction 272 293 - -
Mepo3g03174 460 MobiDBLite consensus disorder prediction 397 460 - -
Mepo3g03174 460 Pfam Nuclear transport factor 2 (NTF2) domain 13 127 IPR002075 -
Mepo3g03174 460 Gene3D - 3 132 - -
Mepo3g03174 460 ProSiteProfiles Nuclear transport factor 2 domain profile. 13 127 IPR018222 -
Mepo3g03174 460 SUPERFAMILY NTF2-like 9 130 IPR032710 -
Mepo3g03174 460 MobiDBLite consensus disorder prediction 180 202 - -
Mepo3g03174 460 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 327 394 IPR000504 GO:0003723
Mepo3g03174 460 FunFam Nuclear transport factor 2 family protein 4 131 - -
Mepo3g03174 460 SUPERFAMILY RNA-binding domain, RBD 321 432 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03174 Mepo-Chr3 41863824 41868059 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03174 - - cam:101501784 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03174 3 41863824 41868059 Mepo3g03174 3 41863824 41868059 ECH