Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03171 ATGGGTATCCTTAGAACAAAACAAACACTCTCATTTCTGATTCTGCTCAATTTTTCATCACTAGTTTTCACCACTGATAACACCAACGTTGTTTACAAAGGTTGTTCAGAGCAAAAACTAGGACAACAATCATCAGAAAATCTGCAAACGTTGTTATCTTCTCTTGTTGCAGCATCAGGACAGAAAACTTTCGCCGCCACAACCACCGGTGACGGCCAGAACGCAGTCACCGGAGTTTACCAATGCAGAGGTGACCTTTCAGCTTCTGATTGTTATCTTTGTATCAGCAAGATTCCAAGCAAGATAAGCAAGCTTTGTGGTGATGTCGCGGCTGCGAGGATTCAGCTCAATGGATGTTATTTAAGGTACGAGGTTGTTGGGTTCAGGCAAGTTCCGCAGACACAATTGTTGTACAAGGTTTGTGGTTCGAAGAAGGTGAATGATGGTGTTGGGTTTGAAGCTAAGAGGGATTCAGCGTTTGGAATGGTGGAGAATGGTGTTAAGAGTGGTGGGACTTTGTTCTATACAGGGAGTTATTCGTCTTTGTATGTTTTGGGACAGTGTGAGAGTAGTTTGGGAAATGATGATTGTGGTAATTGTGTTAAGAGTGCTGAAGAACAAGCTAAATTGGAGTGTGGTGATTCAATTTCTGCTCAGATTTATCTTTTTAGTTGCTTTATTAGTTACAGCTTTTATCCTAATGGAGTTTCCATCACTTCTTCCTCTTCAGGATCAGGAGGGAATCCACACACAGAGAGGACAGTTGCTCTTGCTGTGGGAGGAGTTGCAGCTCTTGGATTCTTGATTGTTTGTTTGATGTTTCTGAAATCAGTGCTCAAGAAAAGAAATCATGGGAAGTATTGA 864 0.4178 MGILRTKQTLSFLILLNFSSLVFTTDNTNVVYKGCSEQKLGQQSSENLQTLLSSLVAASGQKTFAATTTGDGQNAVTGVYQCRGDLSASDCYLCISKIPSKISKLCGDVAAARIQLNGCYLRYEVVGFRQVPQTQLLYKVCGSKKVNDGVGFEAKRDSAFGMVENGVKSGGTLFYTGSYSSLYVLGQCESSLGNDDCGNCVKSAEEQAKLECGDSISAQIYLFSCFISYSFYPNGVSITSSSSGSGGNPHTERTVALAVGGVAALGFLIVCLMFLKSVLKKRNHGKY 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03171 287 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 12 278 - -
Mepo3g03171 287 FunFam cysteine-rich repeat secretory protein 3 27 128 - -
Mepo3g03171 287 FunFam cysteine-rich repeat secretory protein 3 134 233 - -
Mepo3g03171 287 Gene3D - 133 233 IPR038408 -
Mepo3g03171 287 Gene3D - 26 128 IPR038408 -
Mepo3g03171 287 ProSiteProfiles Gnk2-homologous domain profile. 26 128 IPR002902 -
Mepo3g03171 287 ProSiteProfiles Gnk2-homologous domain profile. 134 234 IPR002902 -
Mepo3g03171 287 Pfam Salt stress response/antifungal 147 231 IPR002902 -
Mepo3g03171 287 Pfam Salt stress response/antifungal 41 124 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03171 Mepo-Chr3 41833820 41835201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03171 66 230 Receptor kinase-like Gene Family AT5G40380 28.743 5.47e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03171 - - gmx:100810212 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03171 3 41833820 41835201 Mepo3g03171 3 41833820 41835201 ECH
Mepo3g03171 3 41833820 41835201 Mepo4g03266 4 42179575 42180742 PCT