Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03139 ATGTATCTTCAGTTTTACATCAACGATAACGGTGACAAGGTCTACACCACTAAGAAAGAGTCACCGCTTGGGTTAGCTACTCAATCTGCTCATCCAGCCCGGTTTTCACCTGATGACAAATTTTCAGAGCAGAGAGTTAAACTGAAGAAGCGATTTGGACTGTTACCGACCCAGCATCCAGCTCCAAAGCTTCATCATGCTTTTAAAAAGGCCAGGTCAGGCCTCGAGAATGAGCCTATGACAGATAAGGCATTTGTGCAGAATGTGATGAATATAACTAGGCTCTTGATCAATCCTGACATCCCAGAGGCTCTTCAATTGAAGAATGGGTCGTCTTTTGATGAAGTGTATTTGCGATTGTATGCGAAGAAAACCATTGCTCGGCTGACTGATATACCTGACGATGGAACTTTTATTGGTAATTTGGAACGGGAAGTGATTGTGTACAACTAA 453 0.4283 MYLQFYINDNGDKVYTTKKESPLGLATQSAHPARFSPDDKFSEQRVKLKKRFGLLPTQHPAPKLHHAFKKARSGLENEPMTDKAFVQNVMNITRLLINPDIPEALQLKNGSSFDEVYLRLYAKKTIARLTDIPDDGTFIGNLEREVIVYN 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03139 150 Gene3D H/ACA ribonucleoprotein complex, subunit Nop10 10 54 - -
Mepo3g03139 150 SUPERFAMILY Nop10-like SnoRNP 3 58 IPR036756 GO:0001522|GO:0030515|GO:0042254
Mepo3g03139 150 PANTHER RIBOSOME BIOGENESIS PROTEIN NOP10 1 63 IPR007264 GO:0001522|GO:0030515|GO:0042254
Mepo3g03139 150 FunFam H/ACA ribonucleoprotein complex subunit 3 10 54 - -
Mepo3g03139 150 Pfam Nucleolar RNA-binding protein, Nop10p family 3 52 IPR007264 GO:0001522|GO:0030515|GO:0042254
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03139 Mepo-Chr3 41516196 41521606 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03139 K11130 - aof:109827796 124.405