Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03131 ATGGATAAATCAAAGCTAGCTCAATTCGGCGAGAGGCTCAAAACCAGCAGCGCCAACATGAGCCGAATCGTAAGCGACAAAATGAAAGAAATTCTCCAAACACCAACCCCTGAATCCAAAATGGTCGACGAAGCAACATCGGAAACTTTATCTGAACCTAATTGGGGTATGAATCTCAGAATCTGCGGCCTTATTAACGCCGAACAGTTTAACGGTTCTGAAATAGTGAAAGCTATTAAGAGGAAGATTAATCATAAGAGTCCTGTTGTTCAGAAACATAGTCTTGATTTGTTGGAAACTTGTGCTATGAATTGTGATAAAGTGTTTTCTGAAATTGCTTCTGAGAAGGTTCTTGATGATATGGTTAGATTGATTGAGAATAATCAGGTTGATAGTGGTAATAGAAGAAGGGCTTTTCAGTTGATTAGGGCTTGGGGTGAGTCTCATGATATTGCTTATCTTCCTGTTTTCAGCCAGACTTACATGAGTTTGAAAGGAAAGGGTGAATCACTTGACATGACGACAGGAAATTCACCACCTATTCCGTATGCCTCAGAGTCAAGTGCTTATCAACATCCTTTAGATCCCCCTGAAAGATACCCAGTTCCAGAAGCAGGGCTACATGCTCTTGCTCTGGATGACTCGGCAGCTTTCTTTTCTGATCACCAACCAGCATCAGCTGAAGAGAAGAAAGAGCATCTTGTGGTTGCTCGAAACAGTCTTGAATTGCTCTCTAGCATATTAAATTCTGAGGCAGAGCCAAAACCTTTAAAGGAAGATTTAACTTTGAGTCTGCTGGATAAGTGCAAGCAATCACTCTTTCTTATCAAGGAGATTGTGGAAAGCACCGCAAATGACGAAGAGACACTTTTTGAGGCTTTATATCTCAATGATGAGCTGCAGCAGTTGGTTTCTAAGTATGAGGAGTTGGAAGCTTCTCAAAATTCAGAGGCACAAAGTGTTGACACTGCAGGGCATGATGCGGAAGCTGTTCAAAACCCCACCGAAAGGCATGAAGTGGAAGCTGTTCAAAACCCCAGTGAAAGGCGTGAAGGTGATGAGTCCGGAGAGCTGTCAGAAGCTGCTCAGAGTCTTGATCGAAAGCTGCCTCAAAAGTCAAACACTCGTGAAGTCATTGTCGATGCATCCGAGGGGGTTAGTCATGTTGAAACCAAAATAGTGGATAGCACGAAAGAGAAGAATGTTGAACCTAGCCTCAAGACTAATACCGAATGA 1236 0.4264 MDKSKLAQFGERLKTSSANMSRIVSDKMKEILQTPTPESKMVDEATSETLSEPNWGMNLRICGLINAEQFNGSEIVKAIKRKINHKSPVVQKHSLDLLETCAMNCDKVFSEIASEKVLDDMVRLIENNQVDSGNRRRAFQLIRAWGESHDIAYLPVFSQTYMSLKGKGESLDMTTGNSPPIPYASESSAYQHPLDPPERYPVPEAGLHALALDDSAAFFSDHQPASAEEKKEHLVVARNSLELLSSILNSEAEPKPLKEDLTLSLLDKCKQSLFLIKEIVESTANDEETLFEALYLNDELQQLVSKYEELEASQNSEAQSVDTAGHDAEAVQNPTERHEVEAVQNPSERREGDESGELSEAAQSLDRKLPQKSNTREVIVDASEGVSHVETKIVDSTKEKNVEPSLKTNTE 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03131 411 Gene3D - 28 182 IPR008942 -
Mepo3g03131 411 MobiDBLite consensus disorder prediction 311 411 - -
Mepo3g03131 411 MobiDBLite consensus disorder prediction 391 405 - -
Mepo3g03131 411 ProSiteProfiles GAT domain profile. 187 312 IPR004152 GO:0035091|GO:0043130
Mepo3g03131 411 Coils Coil 293 317 - -
Mepo3g03131 411 MobiDBLite consensus disorder prediction 331 361 - -
Mepo3g03131 411 Pfam VHS domain 38 149 IPR002014 GO:0035091|GO:0043130
Mepo3g03131 411 CDD VHS 39 165 - -
Mepo3g03131 411 ProSiteProfiles VHS domain profile. 45 172 IPR002014 GO:0035091|GO:0043130
Mepo3g03131 411 PANTHER TOM1-LIKE PROTEIN 1 1 375 IPR044836 GO:0035091|GO:0043130|GO:0043328
Mepo3g03131 411 SUPERFAMILY GAT-like domain 193 311 - -
Mepo3g03131 411 Gene3D - 215 315 IPR038425 -
Mepo3g03131 411 SUPERFAMILY ENTH/VHS domain 34 168 IPR008942 -
Mepo3g03131 411 Pfam GAT domain 238 311 IPR004152 GO:0035091|GO:0043130
Mepo3g03131 411 SMART VHS_2 38 168 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03131 Mepo-Chr3 41404490 41408329 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03131 - - mtr:25499268 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03131 3 41404490 41408329 Mepo3g03131 3 41404490 41408329 ECH