Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo3g03103 | ATGTCTGCGAATTCGCTAAACGACGTCGCTTCGTGCTCATCAGAGATGGAGAAGTTCCTGTGCGAGTTGCTGTTAGACTCAACCCAGCCAATTTCCGAACGCTTCAGAGCACTCTTCTCTCTTCGCAACCTCAAAGGCCCCGCCCCTCGCACCGCCCTTATTCTCGCGACAAGAGATTCATCAAATTTGTTGGCTCACGAAGCTGCATTTGCATTAGGGCAAATGCAAGAACTCGAAGCCATACCTGCATTAACCTCAGTTCTTAATGATCTTTCTTTGCATCCCATTGTTCGCCATGAGGCAGCAGAAGCACTTGGCGCTATTGGTTCAGATAGTAATGTTTCTCTTTTGAAGCATAGTTTGGATTCTGATCCGGCTCAAGAGGTTCGAGAAACTTGTGAATTGGCTCTTCAACGTATTCTTAATTTAAAACATGCTGCTACTACTGATGATTTGACTGCACCTGGTATTTCTCCGTTTAAGTCTGTTGATCCTGCGGCACCGGCCAGCTCTTGTTCTTCAGTTAGTCAACTAAGGGATTTACTTCTCGATGAGGAAAAAGGGATGTATGAGCGCTATGCAGCTCTTTTTGCACTTCGAAATGATGGCGGAAATGAAGCTGTTGCTGCTATTGTTGATTCCTTGGGTTCCAAGAGTGCTTTACTGAAACATGAGGTTGCATATGTTTTGGGCCAATTGCAAGACAAAGCTGCTTCAGCTGCTCTATCCAATATACTTAGAGATGTGAATGAGCATCCAATGGTTAGACATGAGGCTGCTGAAGCTCTTGGTTCAATTGCAGATGACCAAAGTGTATCCCTTCTTGAGGAATTTTCGGCAGACCCAGAGCCTCTTGTTGCACAAAGTTGTCAAGTTGCTCTAAGCATGCTAGAATTTGAAAGATCAGGGAAATCATTTGAGTTCCTGTTCATGCGTACTCCAATTGTACATTAA | 954 | 0.4455 | MSANSLNDVASCSSEMEKFLCELLLDSTQPISERFRALFSLRNLKGPAPRTALILATRDSSNLLAHEAAFALGQMQELEAIPALTSVLNDLSLHPIVRHEAAEALGAIGSDSNVSLLKHSLDSDPAQEVRETCELALQRILNLKHAATTDDLTAPGISPFKSVDPAAPASSCSSVSQLRDLLLDEEKGMYERYAALFALRNDGGNEAVAAIVDSLGSKSALLKHEVAYVLGQLQDKAASAALSNILRDVNEHPMVRHEAAEALGSIADDQSVSLLEEFSADPEPLVAQSCQVALSMLEFERSGKSFEFLFMRTPIVH | 317 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo3g03103 | 317 | PANTHER | PBS LYASE HEAT-LIKE PROTEIN | 24 | 302 | - | - | |
| Mepo3g03103 | 317 | FunFam | Deoxyhypusine hydroxylase | 166 | 307 | - | - | |
| Mepo3g03103 | 317 | Gene3D | - | 161 | 306 | IPR011989 | - | |
| Mepo3g03103 | 317 | Gene3D | - | 5 | 153 | IPR011989 | - | |
| Mepo3g03103 | 317 | SUPERFAMILY | ARM repeat | 94 | 296 | IPR016024 | - | |
| Mepo3g03103 | 317 | SMART | E-Z type HEAT repeats | 31 | 60 | IPR004155 | - | |
| Mepo3g03103 | 317 | SMART | E-Z type HEAT repeats | 253 | 282 | IPR004155 | - | |
| Mepo3g03103 | 317 | SMART | E-Z type HEAT repeats | 189 | 218 | IPR004155 | - | |
| Mepo3g03103 | 317 | SMART | E-Z type HEAT repeats | 220 | 249 | IPR004155 | - | |
| Mepo3g03103 | 317 | SMART | E-Z type HEAT repeats | 62 | 91 | IPR004155 | - | |
| Mepo3g03103 | 317 | SMART | E-Z type HEAT repeats | 95 | 124 | IPR004155 | - | |
| Mepo3g03103 | 317 | Pfam | PBS lyase HEAT-like repeat | 255 | 281 | IPR004155 | - | |
| Mepo3g03103 | 317 | Hamap | Deoxyhypusine hydroxylase [DOHH]. | 17 | 307 | IPR027517 | GO:0008612|GO:0019135 | |
| Mepo3g03103 | 317 | FunFam | Deoxyhypusine hydroxylase | 8 | 156 | - | - | |
| Mepo3g03103 | 317 | Pfam | HEAT repeats | 55 | 137 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo3g03103 | Mepo-Chr3 | 41150636 | 41154688 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo3g03103 | K06072 | - | gmx:100815364 | 515.383 |