Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03060 ATGGAACCAATCAATTGTCTGCGGCCTGAATTTGTTCCGAGTGGCGGCACCCCTCTGCCGGAGAGTCCTCGAGTTCCTATGGAGTTTTTGTCAAGGTCATGGAGTGCTTCAGCTCTTGAAGTCACAAAAGCTCTTGCACCAGCTCATTCTCAACCACCTCATTCTTCATGCATGCCTTCAAATGGTTCTATTCCTGAAGAAACCACTAACCACTCTTTGTCTGAAGATCTCTCTATACAGTCTAAGAATCAGTTCTCTTTTGCTTCCTCTGCTACTTCGCAGCTCGTCCTTGAGCGCATTATGTCACACTCTGCAAGAGAGGAAGTGTCGCCGTTAACATCAGGTAGATTATCTCACAGCAGCGAACCTTTGAACGGTGGCGGTTCATTAACTGGAACAGACAGTCCAATTTCTCATTCAGATGAATTTGACGATGTTGTCAAGTTTTTTCGGACAAACAATTCCATTCACCCATTATTCAATGGTGGAAGAGCAAATGCCGGTGTTGGCAATGGCACGGCTTGTTCAGGACCTAAAACTGTAGGAAGGTGGTTGAAAGAGAGAAGAGAAAAGAAGAAAGAAGAAAGCAGAACACAAAATGCTCAGCTGCACGCTACTATTACTGTGGCTGCTGTTGCTTCTGCTATAGCTGCCATTGCGGCAGCAACAGCAAATTCATCAACACAAAACAAGGATGAGAAGATGGCCAAGACAGACGTGGCTGTTGCTTCCGCTGCCACTCTAGTTGCCGCACAATGTGTGGAGGCTGCCGAAGCAATGGGAGCTGAGCGTGAGCACCTTGCATCGGTGGTCAGCTCAGCTGTGAATGTTCATTCTCATGATGATATCACTACTCTTACTGCTGCAGCTGCCACAGCTCTCCGAGGAGCAGCAACACTGAAAGCTAGAGCTGTGAAGGACTTATGGAATGGTGCTGCTGTAACACCATTGGAGAAAGGAATGGGAGGTATACCAATATCTGGAAAAGGTAATAACATAAAAAACATCAACAACAGCACCAGTGATAGTGGAGAAATTGTGAATGCAGATGGTTTTATAGGTTCCTGCAGCCAAGAACTACTTGCTAAGGGCAGTGAATTACTCAAACGCACCCGTAACGGTGATCTACACTGGAAAATAGTTTCTGTTTACATTCATCGAACAGGACATGTAATGCTGAAAATGAAGAGCAAACATGTTGCAGGAACAATAACAAAAAAGAACAAGAATATTGTGCTAGACGTGTGCACGGATTTACCAGCATGGCCAGGAAGAGATCTATCAGATGATGGAGAAAAACGACGCTACTTCGGATTGAAAACAGACTCGAGGGGAATTGTCGAGTTCGAGTGTAGAAATCAAAGAGAATATGATATCTGGACTCAAGGGGTTTCTAGGCTTCTCTCAATCATTACACAAAGACAAAACAAATACAACAATTGA 1443 0.4463 MEPINCLRPEFVPSGGTPLPESPRVPMEFLSRSWSASALEVTKALAPAHSQPPHSSCMPSNGSIPEETTNHSLSEDLSIQSKNQFSFASSATSQLVLERIMSHSAREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPISHSDEFDDVVKFFRTNNSIHPLFNGGRANAGVGNGTACSGPKTVGRWLKERREKKKEESRTQNAQLHATITVAAVASAIAAIAAATANSSTQNKDEKMAKTDVAVASAATLVAAQCVEAAEAMGAEREHLASVVSSAVNVHSHDDITTLTAAAATALRGAATLKARAVKDLWNGAAVTPLEKGMGGIPISGKGNNIKNINNSTSDSGEIVNADGFIGSCSQELLAKGSELLKRTRNGDLHWKIVSVYIHRTGHVMLKMKSKHVAGTITKKNKNIVLDVCTDLPAWPGRDLSDDGEKRRYFGLKTDSRGIVEFECRNQREYDIWTQGVSRLLSIITQRQNKYNN 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03060 480 Pfam Auxin canalisation 20 320 IPR008546 -
Mepo3g03060 480 MobiDBLite consensus disorder prediction 44 71 - -
Mepo3g03060 480 MobiDBLite consensus disorder prediction 107 137 - -
Mepo3g03060 480 MobiDBLite consensus disorder prediction 106 138 - -
Mepo3g03060 480 MobiDBLite consensus disorder prediction 53 71 - -
Mepo3g03060 480 PANTHER EXPRESSED PROTEIN 17 471 IPR040269 -
Mepo3g03060 480 Pfam Plant pleckstrin homology-like region 366 470 IPR013666 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03060 Mepo-Chr3 40749049 40752060 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03060 - - gmx:100805743 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03060 3 40749049 40752060 Mepo3g03060 3 40749049 40752060 ECH
Mepo3g03060 3 40749049 40752060 Mepo4g02895 4 37915292 37919110 PCT