Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03050 ATGTTGATGTTTTCTATCCTCACACTGATAGTTTTAAAATTCAGACCGGACCGGATCGGCCGGTCGGACCGGACCGGTTCTACCCGGAACCGGTGTCATTATCGGTTCGAGCAGATAGTTGGATCGAATATGCAGTTGAACCGTAACGAACTGCTTTCATGGCCAAAAACATTGGTAAAAAAATGGTTCAATATCAAGAGCAAATCTGAAGACTTTCAAGCAGATGATGTCATTTGTCAAGTTGTTGATGACGAGTATAGGAGGAATTACTCAGAGGTGGAGGCATGTTCTATAAAAAAAAGCAAAACAGAGAGATCAAGCAGAGGGTACATAGATGGAATGAAAAGAGGTAAGAATTACCTTCGTGAAGCTCAAGTTACAGATGTATGTAATTATAGAATATTCGTTGCGACTTGGAACGTGGCTGGGAAATCACCTCCAAGTTATTTAAGTCTGGAAGATTGGCTTCACATTTCTCCACCTGCGGATATCTATGTTCTTGGGTTTCAAGAAATTGTGCCTCTCAATGCCGTTAATGTTTTGGGAACAGAAGACAATGGTCCTGCAAGAAAATGGCTAGCCCTTATACGGAAGACACTGAACAATCTTCCGGGAACAAGTGGTGGATACAACACTCCTTCTCCAATCCCTGCTCCTATTGTAGAGTTAGATGCTGATTTCGAGGGATCAATGAGGCAGAAGGCAACCTCTTTCTTCCATCGGAGGTCCTTCCAAGCCATGAGTCGTAGTATGAGAATGGATAATGAGATGTCACTTCCACAAACTTGCCTTGATCGTCGTCTCAGTGTCTGTGATAGAATGATATCTGGTCACAGGACAAGTGACAATGACACCAATTGTCGATGGGGTTCCTCAGATGATGAAAATGGAGCTGGTGAATCCCCAATTACAACAGATTATTCGCCAATTTCTTATAGTGGTTGTTTCCCTACCGAGGACAGTGACAGACCGAGAGGAAACTCGAGATACTGTTTGGTTGCTAGTAAGCAAATGGTAGGGGTATTTCTAACAGTTTGGGTGAAAAGTGATATCAGAGATGATGTTCATAACATGAAAGTGTCTTGTGTTGGAAGAGGATTGATGGGCTATCTTGGAAACAAGGGTTCAATATCAATTAGTATGTCATTGCGCCAAACGAGTTTTTGCTTCGTCTGTAGTCATTTGACTTCCGGACAAAGGGATGGTGATGAGCTTAGGAGAAATTCAGATGTAATGGAGATTCTCAGAAAGACAAGGTTTCCTCAGGTCCTTGACACAAGTGATGCAAATTCTCCTCGGACAATTCTGGAACATGACCGAATAATTTGGCTGGGGGATTTAAATTACCGGATTGCACTTTCTTACCATGGAGCAAAAGCTCTTGTTGAGATGCATGATTGGAAGACTTTGTTAAAGAATGACCAGCTGTGTATAGAGAAACGGCAAGGCCGTGTCTTTACCAGATGGAGTGAAGGGAAAATATATTTCCCTCCCACATATAAGTATTCAAACAATTCAGATAGTTATGCAGGTGATGATAGACGCTCAAAACAAAAGAGAAGAACTCCAGCATGGTGTGATCGTATCTTGTGGTATGGAAGTGGCCTACAACAATTATCTTATGTTCGCGGCGAGTCAAGATTCTCTGATCATAGACCGGTTTGTAGCATATTCTTGGCAGAAGTTGAGTCTATTAACAGTAACCAAATAAAGAAAGGTTCTACTTGCTCCAGTTCCAGGATTGAAATAGAAGAGTTATTGCCACATTCACACGGTTACGACTTCCATTTCTATTGA 1797 0.419 MLMFSILTLIVLKFRPDRIGRSDRTGSTRNRCHYRFEQIVGSNMQLNRNELLSWPKTLVKKWFNIKSKSEDFQADDVICQVVDDEYRRNYSEVEACSIKKSKTERSSRGYIDGMKRGKNYLREAQVTDVCNYRIFVATWNVAGKSPPSYLSLEDWLHISPPADIYVLGFQEIVPLNAVNVLGTEDNGPARKWLALIRKTLNNLPGTSGGYNTPSPIPAPIVELDADFEGSMRQKATSFFHRRSFQAMSRSMRMDNEMSLPQTCLDRRLSVCDRMISGHRTSDNDTNCRWGSSDDENGAGESPITTDYSPISYSGCFPTEDSDRPRGNSRYCLVASKQMVGVFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLRQTSFCFVCSHLTSGQRDGDELRRNSDVMEILRKTRFPQVLDTSDANSPRTILEHDRIIWLGDLNYRIALSYHGAKALVEMHDWKTLLKNDQLCIEKRQGRVFTRWSEGKIYFPPTYKYSNNSDSYAGDDRRSKQKRRTPAWCDRILWYGSGLQQLSYVRGESRFSDHRPVCSIFLAEVESINSNQIKKGSTCSSSRIEIEELLPHSHGYDFHFY 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03050 598 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 59 578 IPR045849 GO:0004445
Mepo3g03050 598 SUPERFAMILY DNase I-like 114 572 IPR036691 -
Mepo3g03050 598 FunFam Type IV inositol polyphosphate 5-phosphatase 7 300 586 - -
Mepo3g03050 598 Gene3D Endonuclease/exonuclease/phosphatase 304 585 IPR036691 -
Mepo3g03050 598 Gene3D Endonuclease/exonuclease/phosphatase 112 216 IPR036691 -
Mepo3g03050 598 MobiDBLite consensus disorder prediction 281 306 - -
Mepo3g03050 598 Pfam Endonuclease/Exonuclease/phosphatase family 137 551 IPR005135 GO:0003824
Mepo3g03050 598 SMART i5p_5 266 566 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03050 Mepo-Chr3 40599342 40611647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03050 333 531 Acyl Lipid Metabolism Gene Families AT1G05630 30.493 5.66e-26 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03050 - - gmx:100803074 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03050 3 40599342 40611647 Mepo3g03050 3 40599342 40611647 ECH
Mepo3g03050 3 40599342 40611647 Mepo4g02903 4 38045446 38049971 PCT