Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03033 ATGGAGCTTAGCAAAGTAACGCTAGAGATATTCACAAAACTAGAACAACAATGGCTATCAGTTTCACGATGTGGAACATCATCCAAAACTCGCATTCTCAGCATTGACGGCGGAGGAACCACCGCCATTGTCTCCGGCGCTGCCTTAATCCACCTTGAGGATCAGATCCGCTTACAAACCAACGATCCTCACGCTCAAATCATGGATTACTTCGACATCATCACCGGCACTGGCATTGGTGCAATACTCGCTGCAATGATCACCGCTGATGATGGATTTGGTAGACCTCTCTATACTGCTAGAGATGCTGTAAATTTCATTGCTGACAGGAATCATGAGTTTTATAAAATGAAAACCGTCGGTGTTTTTCGCCGGCGCCGGAGATTCTCAACCAAGAGCATTGAAAATTTGTTGAAGCGAGTTTTTCAAGGAAAAGAAAGCGAGGGAAAATCGTTGACGTTGAAGGATACGATTAAGCCTTTGCTTATTCCTTGTTATGATCTCAAGACTTCAGCACCGTTCGTTTTCTCACGAGCAGATGCGTCGGAGTCACCGAGTTTCAACTTCGAACTCTGGAAAGTGTGTCGCGCCACTTCATCAACTCCAAGTCTCTTCAAGCCGTTTCAATTCGCTTCCGTGGATGGAAAAACCTCTTGCTCAGCCGTCGACGGTGGTTTGGTGATGAACAATTCGGCAGCAGCGGCTGTTACGCATGTTCTTCATAACAAGCGTAATTTCCCGTCGGTGAATAGTGTTGAGGATCTGATGGTTCTGTCCATCGGAAACGGAGTACCAGCGAACAGAGTGTGTCGTGATGTTCGTGAATGTTCAACGTCGACGGTGGTTGATATTGCTCTCGACGGTGTTTCAGAAACAGTTGATCAGATGTTGGGAAATGCCTTCAGTTGGAACCGTACTGACTATGCGAGGATTCAGGCATTTGGTTTGGGAGAAAAGGGAAGTTGGGAAGAAACGGAGGTGTTGAATGAGAGAGTGTTGGAGTCGTTACCGTTTGGTGGGAAACGGTTACTACAAGAAACTAACGGTAACAGAATTGAGAGGTTTGTGCAACGTCTTGTTGCTACTGGAAAGTCTAGTTTGCCACCTAGTCCATGCAAGATTACACCGTTAGTCTCGTGCTAA 1143 0.4619 MELSKVTLEIFTKLEQQWLSVSRCGTSSKTRILSIDGGGTTAIVSGAALIHLEDQIRLQTNDPHAQIMDYFDIITGTGIGAILAAMITADDGFGRPLYTARDAVNFIADRNHEFYKMKTVGVFRRRRRFSTKSIENLLKRVFQGKESEGKSLTLKDTIKPLLIPCYDLKTSAPFVFSRADASESPSFNFELWKVCRATSSTPSLFKPFQFASVDGKTSCSAVDGGLVMNNSAAAAVTHVLHNKRNFPSVNSVEDLMVLSIGNGVPANRVCRDVRECSTSTVVDIALDGVSETVDQMLGNAFSWNRTDYARIQAFGLGEKGSWEETEVLNERVLESLPFGGKRLLQETNGNRIERFVQRLVATGKSSLPPSPCKITPLVSC 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03033 380 Pfam Patatin-like phospholipase 33 235 IPR002641 GO:0006629
Mepo3g03033 380 CDD Pat17_PNPLA8_PNPLA9_like 32 336 - -
Mepo3g03033 380 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 33 236 IPR002641 GO:0006629
Mepo3g03033 380 Gene3D Cytosolic phospholipase A2 catalytic domain 23 367 - -
Mepo3g03033 380 PANTHER PATATIN-LIKE PROTEIN 6 1 373 - -
Mepo3g03033 380 SUPERFAMILY FabD/lysophospholipase-like 29 316 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03033 Mepo-Chr3 40430201 40432071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03033 1 377 Acyl Lipid Metabolism Gene Families AT3G63200 67.876 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03033 - - gmx:100806989 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03033 3 40430201 40432071 Mepo3g03033 3 40430201 40432071 ECH
Mepo3g03033 3 40430201 40432071 Mepo4g02922 4 38266183 38267866 PCT