Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03031 ATGGTGATGAGTGTTCAATTTCAACTATCATCATCATCTTGCTTATGGCTTCCAAATTCTCCATCTCCACCAATTTCAATTTCTCCGCAATTTCTTCCCACCCGCTGTAGCAGGTTTTCCACTTCACCTCTCGCTGCCACACCAACCCTCCAACCCCAATCTCCCACCATTCAGATAATTGGCAACAATGCATTTGATGGTTCTGAAGGAGGGACCGGGACCGATCTTTGGACTGGTCTTGACACTGATCTTTATCACTGGACAAAGGTTTTACGACCTGTGCAGTGGTTTCCTGGTCATATTGCAAAAGCAGAAAAGGAACTGAAGGAACAGCTTAAGTTGATGGATGTTGTTATAGAGGTACGAGACGGGCGAATTCCGTTGTCCACAAGTCATCCACAGATGGATCTATGGCTTGGTAATAAAAAGAGAATTTTGGTTTTAAATAGAGAAGACATGATATCAACTGCAGATCGAAATGCTTGGGCAGAGTATTTTACTAGGCATGGAACAAAGGTTGTCTTCTCCAATGGGCAGCTTGGAATGGGCACATTGAAGCTAGGCCGGTTAGCAAAGGAATTAGCAGCTGATGTAAATGTTAAACGGAGAGCCAAAGGACTACTTCCTCGTCCGGTTCGAGCTGGAATAGTTGGATACCCCAATGTGGGAAAATCATCTCTGATCAACCGTTTGTTAAAGAGAAGAATGTGCCCAGCAGCTCCAAGACCAGGAGTTACAAGAGACTTGAGGTGGGTTCGATTTGGGAAAGATCTTGAATTGCTGGATTCTCCTGGGATACTTCCAATGCGAATCAGTGATCAGTCAGCAGCTATAAAACTTGCCATATGTGATGACATAGGAGAGAGGTCTTATGATGTGGCTGATGTTGCTGCAATTCTTGTTCAGATGCTTACAAAGCTTCCAGCAGTAGGTCGAGATGCACTTTGTAAACGATACAAGTTTCGTGTAGACAGTGAATGTGGTAAAATATTCATAGAGAAGCTTGCGCTTCATTTGTTCAATGGAGATGTTCATCAAGCAGCATACCGTGTCCTGTCAGATTTTAGAAAAGGTAGGTTTGGTTGGACTTCGTTAGAGAGGCCTCCTAGGTGA 1113 0.4394 MVMSVQFQLSSSSCLWLPNSPSPPISISPQFLPTRCSRFSTSPLAATPTLQPQSPTIQIIGNNAFDGSEGGTGTDLWTGLDTDLYHWTKVLRPVQWFPGHIAKAEKELKEQLKLMDVVIEVRDGRIPLSTSHPQMDLWLGNKKRILVLNREDMISTADRNAWAEYFTRHGTKVVFSNGQLGMGTLKLGRLAKELAADVNVKRRAKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRDLRWVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERSYDVADVAAILVQMLTKLPAVGRDALCKRYKFRVDSECGKIFIEKLALHLFNGDVHQAAYRVLSDFRKGRFGWTSLERPPR 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03031 370 FunFam Mitochondrial GTPase 1 272 360 - -
Mepo3g03031 370 Gene3D - 272 360 IPR023179 -
Mepo3g03031 370 PRINTS GTP1/OBG GTP-binding protein family signature 214 234 IPR006073 GO:0005525
Mepo3g03031 370 PRINTS GTP1/OBG GTP-binding protein family signature 260 275 IPR006073 GO:0005525
Mepo3g03031 370 NCBIfam ribosome biogenesis GTPase YlqF 94 366 IPR019991 -
Mepo3g03031 370 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 105 269 IPR030378 GO:0005525
Mepo3g03031 370 FunFam DAR GTPase 3 chloroplastic 94 267 - -
Mepo3g03031 370 Gene3D - 94 267 IPR027417 -
Mepo3g03031 370 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 83 369 - -
Mepo3g03031 370 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 283 IPR027417 -
Mepo3g03031 370 Pfam 50S ribosome-binding GTPase 214 284 IPR006073 GO:0005525
Mepo3g03031 370 CDD YlqF 96 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03031 Mepo-Chr3 40396615 40401526 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03031 K19828 - gmx:100784201 564.303