Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03011 ATGTTCCCTCAAAACCTCCTTCTTCTTCTAAACCTCCTCGCCGGAAAGAAGGACTCTTTCGTTACCGACGGCGACGATGTTCCGTTCGGTACGTTATGGTGGTTTATTTACGCCGGAGTTTCTTTCTTGCTTGTTCTCTTTGCTGGTATCATGTCCGGTCTTACGCTTGGTTTAATGTCTAAACGTCCTGTTGACCTTGAAATTCTTCAGCGTAGTGGTTCTTCCACTGAGAGAAAACAAGCTGCTGCTATTTTTCCTGTTCTTCAAAAACAACACCAGCTGCTTGTTACTTTGCTTCTCTGTAATGCTTGTGCCATGGAGGCACTTCCACTTTACCTGGATAAAATTTTTCACCCTGTTGTAGCAGTGTTGTTATCAGTAACTTTTGTTCTGGCTTTTGGAGAGGTCATTCCACAAGCTATATGTACAAAACATGGACTCTATGTTGGAGCTAGTTTTATTGGGCTTGTACGCTTCCTCATGTTCATCTGTTATCCAATTGCTTACCCTATTGGAGTGGGTTTGGATTATTTGCTTGGACACGATGATGTAATGTTTAGGCGAGCACAATTGAAAGCCTTTGTTTCAATCCATAGCAAAGAGGCTGGTAAAGGAGGTGAACTCACACATGATGAGACAACGATTATCAGCGGAGCACTAGATCTCTTTAAGAAGACTGCAGAGCAAGCTATGACATCAATCGATTCAACTTTTTCCTTGGATGTTGCTTCCAAATTGGACTGGGAAGCAATTGGGAGAATTCTTGAACGAGGTCATAGTCGTATCCCCGTATACAGTGGAAATCCAAAAAATATAATTGGCCTCTTGCTAGTAAAAAATCTTCTTACTGTAAGACCTGAGACAGGGAGTCTAGTTAGTTCCTTCAACATCCGGAAAATTCCTAGGTTTCCAGCAGATATGCCTTTATACAATATCCTCAACGAGTTTCAAAAAGGAAACAGTCATATGGCAGTTGTAGTTAAGGTTATAAGAGAGAAAAACAACCCTCAGGAAGCTGGCGACTTAAACAACTCAAAGGATGAAGTAGACATCAAACACTGTTCTAAACTGACTGTGCCATTGCTAGCCGAGACTTATGAGAAACCAGACAATGTTATCAATATTGACAAACTTTCTAGGCATCATAACCCTAGAGGATATAATGATCCCAATAATGCCGGCGAACAATGCCAAGAGAGTGACATGTCACCAAATAGTGTCCATCACTTTCCTTATGATAAAGATGGGGAAGTTATTGGCATCATAACCCTAGAGGATGTTTTTGAAGAACTCCTGCAGGAAGAAATCTGGGATGAAACAGATATAGATGTACATAGGAGAATACGTGTTGCTGCTGTTGCAGCTGCTTCATCTGTGGCACGAGTTCCATTAGGCCAAAAGGTGATGGGTCACAAGCCTGTAGTGAAAGTTTGA 1434 0.4163 MFPQNLLLLLNLLAGKKDSFVTDGDDVPFGTLWWFIYAGVSFLLVLFAGIMSGLTLGLMSKRPVDLEILQRSGSSTERKQAAAIFPVLQKQHQLLVTLLLCNACAMEALPLYLDKIFHPVVAVLLSVTFVLAFGEVIPQAICTKHGLYVGASFIGLVRFLMFICYPIAYPIGVGLDYLLGHDDVMFRRAQLKAFVSIHSKEAGKGGELTHDETTIISGALDLFKKTAEQAMTSIDSTFSLDVASKLDWEAIGRILERGHSRIPVYSGNPKNIIGLLLVKNLLTVRPETGSLVSSFNIRKIPRFPADMPLYNILNEFQKGNSHMAVVVKVIREKNNPQEAGDLNNSKDEVDIKHCSKLTVPLLAETYEKPDNVINIDKLSRHHNPRGYNDPNNAGEQCQESDMSPNSVHHFPYDKDGEVIGIITLEDVFEELLQEEIWDETDIDVHRRIRVAAVAAASSVARVPLGQKVMGHKPVVKV 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03011 477 MobiDBLite consensus disorder prediction 379 404 - -
Mepo3g03011 477 CDD CBS_pair_CorC_HlyC_assoc 226 327 IPR044751 -
Mepo3g03011 477 Gene3D - 395 439 IPR046342 -
Mepo3g03011 477 Pfam CBS domain 405 432 IPR000644 -
Mepo3g03011 477 MobiDBLite consensus disorder prediction 385 404 - -
Mepo3g03011 477 Gene3D - 212 343 IPR046342 -
Mepo3g03011 477 PANTHER METAL TRANSPORTER CNNM 18 453 IPR045095 GO:0010960
Mepo3g03011 477 ProSiteProfiles CNNM transmembrane domain profile. 30 212 IPR002550 -
Mepo3g03011 477 FunFam DUF21 domain-containing protein 210 348 - -
Mepo3g03011 477 SUPERFAMILY CBS-domain pair 216 433 IPR046342 -
Mepo3g03011 477 Pfam Cyclin M transmembrane N-terminal domain 41 211 IPR002550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03011 Mepo-Chr3 40191487 40196126 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03011 K16302 - gmx:100777230 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03011 3 40191487 40196126 Mepo3g03011 3 40191487 40196126 ECH