Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03007 ATGACAAATCTCTTGCCATCATTTTCATTCTCACTCATTCCACTTAATCACAACAAATATGAAACCAAATGTTCGTTTCTCCAAATTAAGCATCACAACCAATTTCTTACTCAAAATTTGCAAGATCTCATTATACCCTTTTCTCATAGTCACACTTCTAAATTGTTTGCCACGTCATCAAGATTGTCCGTAGAAGAAACTGAGCAGAAACTCATTCCTTTCACACAATCTGAAGGTATCAAAACATCATTGTCTTATTTGTTTAGGACAGAAATAGGTGAAGGTTTGGTTAAGGTTTATGTTAAAAAGAAAAAAGATTGTTTTTTTGTTTATATTGAGGTTTCTTCTTTAGAGTTAAGTAATGTTAAAGGTGAAACATTGGTTTTGTGTTGGGGTTTGTATAGGGATGATTCATCAAGTGTGGATGATGGAAAAGGGATGAATGTGAGTCCTTTTGTGGAAAATTCTGTTGGAAAATTTTCAGTTCAATTGGAATTTGACGTTGAACAAGTTCCTTTGTATTTGTCTTTTTTGTTGAGATTGTCTGGGTTGGAAATTAGAACCCATTTGAAAAGGAATTTTTGTGTGCCTGTTGGTTTTCTTCGGGGTCGCCCGGATCCGTTGGGGATCTCATTTTCCCGTGATGGGTCGATCAATTTCGCTGTTTTTTCAAGGCATGCTGATAGTGTGGTATTGTGTTTGTATGATGATGATGATGGTGATGATGATAATGGTGTGGAGAAGCCTGCTTTGGAGATTGATCTTGATCCTTATGTCAATAGGTCAGGTGATATTTGGCATATCGCTTTTGAGAGTGCGGGGAATTTTGTGAGCTATGGTTATCGTTTCAGAGGAGCTAACCGGAATAACAGTTATGCTGAAGGTGTTGTTATGGACCCTTATGCTAGAATTGTTAAGAATTTTTTTCAGAATGGTATTGGTTCTACGAAGAACATTGGATTTTTGAGAAAGGAACCTGCTTTTGATTGGAGTTATGATTGTCATCCGAATTTGGAAATGGAGAAACTAGTGGTGTATAGGTTGAATGTGAAGCGTTTTACCGAGCATGAATCGAGTCAACTTTCCGGTGATTTAGCTGGGAAATTTTCTGGTTTGGCTAATAAATTTCAGCACTTTAAAGATCTGGGGGTCAATGCTGTTTTGTTGGAGCCAGTTTTCACATTTGATGAGAAAAAGGGACCTTATTTTCCTTGTCATTTTTTCTCTCCAATGAACCTTTATGGACCATCTGGTGATCCTGTATCTACTGTAAACTCTATGAAAGAGATGGTGAAAACTATGCATGCCAATGGGATAGAAGTTATAATGGAAGTTGTTTTCACCAATACTGCCGAGACTGGTGCTCTTCAAGGTATTGATGATTTGTCTTATTATTATGCAAATGGGATTGGTGGTTTGAAAGTACATGGTGCTTTGAACTGTAACTATCCTATAATGCAAAATTTGATTTTGGATAGCCTTAGGCATTGGGTAACTGAGTTTCACATTGATGGTTTCTCTTTTGTAAATGCTTCACATTTGTTGAGAGGGTTTCATGGAGAATACTTGTCTCGGCCTCCCTTGGTCGAAGCAATTGCTTTTGATCCGGTACTGTGGAAAACTAAAATCATTGCAGATTGCTGGGATCCTAATGACATGGAACCAAAGGAGACTCGCTTTCCTCATTGGATGAGATGGGCTGAAATAAATACAAACTTCCGCAACGATGTGAGGAACTTTCTAAGAGGTGAAAGTCTTCTTAGCAACCTTGCAACAAGACTTTGTGGCAGTGGGGACCTGTATTCTGACGGAAGAGGCCCATCATTCTCTTTTAATTACATTGCCGGGAATTTCGGACTTTCTCTTGTGGACTTGGTCAGCTTCAGCAGTGCTGACCTAGAGGTGGAGTTGAGTTGGAATTGTGGAGAAGAAGGACCTACTAATAACACTGCTGTTCTTGAAAGACGACTCAAACAAATCCGTAATTTCCTATTCATCTTATTTGTGTCATTAGGAGTACCTATTTTGAACATGGGTGACGAGTGTGGTCACTCTTCTGGTGGTTCTCCTGCATGTGGTGACACAAAACCCTTCAATTGGGCTGCTTTGAAAACAGGTTTTGGTAAGCAAATTACACAATTCATTTCCTTTTTGACTTCCTTGAGAACGAGGCGGAGTGATCTTCTTCAGAGTAGGAGTTTCTTAAAAGAAGAAAACATTGAATGGCGTGGAATTGACAAGGCTCCGCCAAGATGGGAAGATCCATCCTGCAAGTTCCTGGCCATGACTTTGAAGACTGAACAAAATGAGCTTCAAGAGAGCTCTGTATCTTCTGATATATTAGGAGATTTATTTATTGCTTTCAATGCAGATGATCATCCAGAGACTGTAGCTTTACCCTTGCTTCCAGAAGGGATGTCATGGTACCGCTTAGTCGACACCGCACTTCCATTTCCAGGGTTTTTCTTGACCAATGGTGATTTTGTCCCACCTGAGCAAATATCAGGTTTGTCTACTTATGAAATGAAGTCTTACAGCTGCACTTTGTTCGAGGCAAACAAAAACGAAACGCAAGAATTACACTTGCAAAAGGAACAAAAATAA 2604 0.3913 MTNLLPSFSFSLIPLNHNKYETKCSFLQIKHHNQFLTQNLQDLIIPFSHSHTSKLFATSSRLSVEETEQKLIPFTQSEGIKTSLSYLFRTEIGEGLVKVYVKKKKDCFFVYIEVSSLELSNVKGETLVLCWGLYRDDSSSVDDGKGMNVSPFVENSVGKFSVQLEFDVEQVPLYLSFLLRLSGLEIRTHLKRNFCVPVGFLRGRPDPLGISFSRDGSINFAVFSRHADSVVLCLYDDDDGDDDNGVEKPALEIDLDPYVNRSGDIWHIAFESAGNFVSYGYRFRGANRNNSYAEGVVMDPYARIVKNFFQNGIGSTKNIGFLRKEPAFDWSYDCHPNLEMEKLVVYRLNVKRFTEHESSQLSGDLAGKFSGLANKFQHFKDLGVNAVLLEPVFTFDEKKGPYFPCHFFSPMNLYGPSGDPVSTVNSMKEMVKTMHANGIEVIMEVVFTNTAETGALQGIDDLSYYYANGIGGLKVHGALNCNYPIMQNLILDSLRHWVTEFHIDGFSFVNASHLLRGFHGEYLSRPPLVEAIAFDPVLWKTKIIADCWDPNDMEPKETRFPHWMRWAEINTNFRNDVRNFLRGESLLSNLATRLCGSGDLYSDGRGPSFSFNYIAGNFGLSLVDLVSFSSADLEVELSWNCGEEGPTNNTAVLERRLKQIRNFLFILFVSLGVPILNMGDECGHSSGGSPACGDTKPFNWAALKTGFGKQITQFISFLTSLRTRRSDLLQSRSFLKEENIEWRGIDKAPPRWEDPSCKFLAMTLKTEQNELQESSVSSDILGDLFIAFNADDHPETVALPLLPEGMSWYRLVDTALPFPGFFLTNGDFVPPEQISGLSTYEMKSYSCTLFEANKNETQELHLQKEQK 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03007 867 PANTHER GLYCOGEN DEBRANCHING ENZYME 164 853 - -
Mepo3g03007 867 CDD E_set_GDE_Isoamylase_N 207 347 IPR044505 -
Mepo3g03007 867 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 207 302 IPR004193 GO:0004553|GO:0005975
Mepo3g03007 867 Pfam Alpha amylase, catalytic domain 367 452 IPR006047 GO:0005975
Mepo3g03007 867 SMART aamy 347 725 IPR006047 GO:0005975
Mepo3g03007 867 Gene3D Immunoglobulins 195 318 IPR013783 -
Mepo3g03007 867 Gene3D - 738 863 IPR013780 -
Mepo3g03007 867 Gene3D Glycosidases 324 737 - -
Mepo3g03007 867 SUPERFAMILY E set domains 203 314 IPR014756 -
Mepo3g03007 867 CDD AmyAc_plant_IsoA 341 730 IPR044096 GO:0019156|GO:0019252
Mepo3g03007 867 SUPERFAMILY (Trans)glycosidases 326 728 IPR017853 -
Mepo3g03007 867 SUPERFAMILY Glycosyl hydrolase domain 737 852 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03007 Mepo-Chr3 40130568 40133572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03007 59 852 Glycoside Hydrolase AT1G03310 55.922 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03007 K01214 - gmx:100777953 1216.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03007 3 40130568 40133572 Mepo3g03007 3 40130568 40133572 ECH