Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02989 ATGAATTTCTTCAAAACCGTTTTCTCCGACGACCCGGACCCATCAGGATCCGAAACAAACACCGCTTCCTCCAGCGACTCGCCAAAAGCGCCGTTCAATCCCACCGGCGCGTGGAAGAACATCGGCAACCTAATCAAAACCTTCGGCGAAAAATCCGAATCCGTCATCGAAATTTACCGTCGCGATCTTAATGAATTCGGCACAGGTTTGAAGAAGGAGATAGAAGTCGCACACGACTCTCTCGAAACCGTTGGACACGTCATCGACCAATTCGGAAACACCGTGATTAAAGGAACGGCTCAGATCATATCTCAAGGCAAAGACGCAATCCTCGAATCAGAATCTGATTCGAAGAAGAAGAGGATTAGAAAACAGGGTAATTCGAATTCAAAGCTGTATAGTAGATTTGATGCTCAAATTCGTGCAATTCAAGGTGATTCTGATACTTATACAGAAGAACCTTTTGATTTGGAGCGGTATAATAAGTGGAAAATGGAGTTTTCGTTGGAAGGGAAAAAGGATGAAATGGAAAAGTTGTTAAGAGAGAATGATGAAATGGAGAGTGTGTTTAGAAGGTTGGTTCCTAATGTTGTGGATAGGGAAACGTTTTGGTTGAGATATTATTATAAGGTTTATAAGGTTAAGAATGCTGAGGATGTGAGGGCGAAGCTTGTTAAACGAATGTCGAGGACTGAGGATGAGGAGTTGAGCTGGGATGTTGAAGATGAGGAGTATGAAGATGATGACTTTGATGATAAGAGATTGAATAATGTGGAAGAAGTGGATGATTTTCGAGGGGAAGAGTCTAAGGTTGAAAAAAGAGATAGTTTACTGCAGAACAAGATGATGGAGGAATCAAAAGTTGATGAGAATTTGGAGGTTGTTCAAGAGAAGGGTGACGATGGAGAAAGCCAAGTGGATAAAGCGAAGGATTCTGCAGCTGTTTCTGACAAGAAAGTGACGATGGAGAAGAACGTCGGGGATGGGAAGTCTTCACAGGTGGTAAGTCAGAACTCGGAGCAAGAGGGGAAGAAAGAGCTTGAGTGGGATGAGATTGAGGATCTTAGTAGCAATGAGGAAAAGAAGGCAATGGGAATGGGGAGCCCAAGCAAAATTGATTTGCGAAAGCGTCTGAGTTCCGCCGCAGAGGAAGAAGATTTGAGTTGGGATATTGAAGATGATGATGATGATGAGCCTGCCAAGGCTTGA 1209 0.4342 MNFFKTVFSDDPDPSGSETNTASSSDSPKAPFNPTGAWKNIGNLIKTFGEKSESVIEIYRRDLNEFGTGLKKEIEVAHDSLETVGHVIDQFGNTVIKGTAQIISQGKDAILESESDSKKKRIRKQGNSNSKLYSRFDAQIRAIQGDSDTYTEEPFDLERYNKWKMEFSLEGKKDEMEKLLRENDEMESVFRRLVPNVVDRETFWLRYYYKVYKVKNAEDVRAKLVKRMSRTEDEELSWDVEDEEYEDDDFDDKRLNNVEEVDDFRGEESKVEKRDSLLQNKMMEESKVDENLEVVQEKGDDGESQVDKAKDSAAVSDKKVTMEKNVGDGKSSQVVSQNSEQEGKKELEWDEIEDLSSNEEKKAMGMGSPSKIDLRKRLSSAAEEEDLSWDIEDDDDDEPAKA 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02989 402 ProSiteProfiles BSD domain profile. 163 215 IPR005607 -
Mepo3g02989 402 SUPERFAMILY BSD domain-like 132 220 IPR035925 -
Mepo3g02989 402 MobiDBLite consensus disorder prediction 264 402 - -
Mepo3g02989 402 Coils Coil 214 234 - -
Mepo3g02989 402 PANTHER SYNAPSE-ASSOCIATED PROTEIN 13 361 - -
Mepo3g02989 402 Gene3D BSD domain 124 225 IPR035925 -
Mepo3g02989 402 Pfam BSD domain 163 219 IPR005607 -
Mepo3g02989 402 MobiDBLite consensus disorder prediction 385 402 - -
Mepo3g02989 402 SMART wurzfinal6 163 215 IPR005607 -
Mepo3g02989 402 MobiDBLite consensus disorder prediction 341 360 - -
Mepo3g02989 402 MobiDBLite consensus disorder prediction 326 340 - -
Mepo3g02989 402 MobiDBLite consensus disorder prediction 264 325 - -
Mepo3g02989 402 MobiDBLite consensus disorder prediction 12 31 - -
Mepo3g02989 402 Coils Coil 169 189 - -
Mepo3g02989 402 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02989 Mepo-Chr3 40016931 40018938 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02989 - - mtr:25499068 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02989 3 40016931 40018938 Mepo3g02989 3 40016931 40018938 ECH
Mepo3g02989 3 40016931 40018938 Mepo4g03744 4 46927101 46928885 PCT