Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02976 ATGAAGATTTCTACATTTACTCTCATTCTTTTTTACTTCTTTCAACCCACACGAGCAATCTTAGATCCTATCGATTTTTTAGCACTACAATCTATTCGAAGATCGCTTCACGATGTTCCTGGTTCCAAATTCTTCTCATCTTGGGACTTCACCGATGATCCCTGCAACTTCGCCGGCGTTTACTGCTCCGCCGATAAAGTCATTTCACTCAGTCTTGGAGAATCTAGAGCCGCTTCACCTGGCCTCACCGGTAAAATCGACACCGCCATTGGAAAACTCTCGTCTCTCGTAGATTTAACCGTTTCTCCAGGGAGAATTTACGGTCATCTTCCTCAGTCCATTTCACAGTTGAAGAATCTCAAGTTTCTCGGTATTAGTCGGAATTTCATCTCCGGGGAGATTCCGGCAGAGCTCGGTCAGCTTCGTAATCTCAGAACTATTGATCTAAGCTATAACCAGCTCGCCGGAACTATTCCTCCGTCAATCGGAAAATTGCCCGAGTTAAAGAACCTGATTCTCCGTCATAACCGTCTCACTGGTTCAGTTCCATCATTCGCATCGGCTCGAAACCTAAACCGGCTCGATCTAAAGCATAACTCACTCACCGGTTCACTTGCTCCCGATTCTCTCCCTTCATCACTACAGTACCTCACTCTCTCATGGAATCAACTCACAGGGCCAGTGGATCGGGTTTTATACCGTTTAAACCGGTTAAACTATCTCGATCTAAGCTTAAACCGGTTCACCGGTTCAATCCCAACTCAACTATTTTCATTCCCTTTAACAAACCTACAATTAGAAAGAAACCAATTATGCGGTCCAGTTGAACCGTTCAACGAAGTTACAATCCAAACCGTTGATCTAAGCTTCAACAAATTTTCAGGTGAAATATCACCATTATTAGCAACGGTGCAAAATTTGTATCTAAACAACAATGCTTTTACCGGTGAAGTTCCCGGTAGCTTTGTGGAACGGTTATTAGCGGCGAATATTCAGATATTGTATTTGCAGCATAATTATCTTACCGGGATCGTGATTAATCCAACGGCGGAGATTCCGTTGAGTAGTTCTCTTTGTTTGCAGTATAATTGCATGGTTCCTCCTGTTCAGATGACGTGTCCTTCCAAAGCTGGTAACCAGAAAATCAGACCTGCTAAGGAGTGTAACAAATACCATTGA 1179 0.4334 MKISTFTLILFYFFQPTRAILDPIDFLALQSIRRSLHDVPGSKFFSSWDFTDDPCNFAGVYCSADKVISLSLGESRAASPGLTGKIDTAIGKLSSLVDLTVSPGRIYGHLPQSISQLKNLKFLGISRNFISGEIPAELGQLRNLRTIDLSYNQLAGTIPPSIGKLPELKNLILRHNRLTGSVPSFASARNLNRLDLKHNSLTGSLAPDSLPSSLQYLTLSWNQLTGPVDRVLYRLNRLNYLDLSLNRFTGSIPTQLFSFPLTNLQLERNQLCGPVEPFNEVTIQTVDLSFNKFSGEISPLLATVQNLYLNNNAFTGEVPGSFVERLLAANIQILYLQHNYLTGIVINPTAEIPLSSSLCLQYNCMVPPVQMTCPSKAGNQKIRPAKECNKYH 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02976 392 Pfam Leucine Rich Repeat 143 165 IPR001611 GO:0005515
Mepo3g02976 392 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Mepo3g02976 392 FunFam Nuclear pore complex protein NUP107 24 184 - -
Mepo3g02976 392 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 13 390 - -
Mepo3g02976 392 SUPERFAMILY L domain-like 32 365 - -
Mepo3g02976 392 Gene3D Ribonuclease Inhibitor 25 186 IPR032675 -
Mepo3g02976 392 Gene3D Ribonuclease Inhibitor 187 382 IPR032675 -
Mepo3g02976 392 Pfam Leucine rich repeat 166 224 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02976 Mepo-Chr3 39907355 39908792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02976 77 381 Receptor kinase-like Gene Family AT5G46330 32.051 6.82e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02976 - - tpra:123917600 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02976 3 39907355 39908792 Mepo3g02976 3 39907355 39908792 ECH
Mepo3g02976 3 39907355 39908792 Mepo4g03732 4 46777195 46778969 PCT