Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02895 ATGCTTAATTCTCAAAATCCAGAAATGGAAAAACCACCACTACTCAAAATCATCTTACTCCTTCTCACCCAATCACTCCTCGCCACATCATCACACTCTCTAAACCCCACCACCGTCACCTTCTCCGTCACCGAATACGGAGCAATTGGCGACGGCATCCACTACGACACCGTATCAATCCAAACCGCCATAGACTCCTGCCCTGTCTCCATCCCCTGCCGCATCACCTTCCCATCTCCCGGTAACTACCTAACTGCAACCATATTTCTTCGATCCGGCGTTGTCCTCAACGTCGAACCGGGGGCCACCATCCTCGGCGGACCGAGACTGGAAGATTATCCGAAGGAATCTTCGAGATGGTATGTTGTGTTGGCGGAGAACGCGTCGGATGTGGGGATAGCAGGCGGAGGTGTGGTGGATGGACAGGCGGAGAAGTTTGTGGTGAGATATAATGAGAGGAAGAATGTAATGGTGAGCTGGAATCAAACTGGGGATTGTTTGGGTGATGAATGTAGGCCTAGATTAATTGGTTTTCTTGGTTGCAAGAATGTTAAAGTCTTCAATGTTACTCTTAATCAACCTGCTTATTGGTGCTTACACTTGGTAAGAAGTGAAAACATAACCATTCAGGATATTGCAATTTATGGAGATTTGAATATACCAAATAATGATGGGATTGACATCGAGGACTCAAACAATACTGTAATCACTCGTTGCCACATTGATACAGGGGATGATGCAATTTGTCCTAAATCATCCACTGGTCCTGTTTACAACTTAACAGTAACTAACAGTTGGATTCGATCCAAATCTTCTGCAATCAAATTTGGCAGTGCTAGTTGGTTTGAATTCAAGCATTTTGTCTTTGACAATATCACTATTGTTGATTCTCATAGAGGGCTTGCATTCCAGATTCGTGATGGAGGAAATGTAAGTGACATTGTCTTCTCAAACATAAATATACGCACAAGATACTATGATCCATTATGGTGGGGGAGAGCAGAGCCTATCTATGTCACAACTTGCCCAAGAAACTCAACCTCAAAGGAGGCTTCAATCTCAAATGTTCGTTTCATCAACATCACAGCAAATTCTGAAAATGGAATCTTTCTCTCTGGTTCAAAAAGAGGATTGTTGAGAAACTTGAGCTTCATCAACATGAATATCACTTACAGAAGGTTCACCAGTTATGCTGGTGGGTTGTTTGACTATAGGCCAGGATGCCAAGAATTGGTTAAACATAAGACTGCAGGGATAATGATGGAGCACATTGAAGGTCTTGAGGTTAGAAATGTAGAAATGAGATGGGAAAATAATGAACTTGAGCAGTGGAATAATCCTATGGAGTTCAAACCATCTACTGTGAATAACATTCATTTCTCTAATTTTAATTCTGTAGTGTATTCAAATAGCAAATCAAGTCAATAA 1428 0.4202 MLNSQNPEMEKPPLLKIILLLLTQSLLATSSHSLNPTTVTFSVTEYGAIGDGIHYDTVSIQTAIDSCPVSIPCRITFPSPGNYLTATIFLRSGVVLNVEPGATILGGPRLEDYPKESSRWYVVLAENASDVGIAGGGVVDGQAEKFVVRYNERKNVMVSWNQTGDCLGDECRPRLIGFLGCKNVKVFNVTLNQPAYWCLHLVRSENITIQDIAIYGDLNIPNNDGIDIEDSNNTVITRCHIDTGDDAICPKSSTGPVYNLTVTNSWIRSKSSAIKFGSASWFEFKHFVFDNITIVDSHRGLAFQIRDGGNVSDIVFSNINIRTRYYDPLWWGRAEPIYVTTCPRNSTSKEASISNVRFINITANSENGIFLSGSKRGLLRNLSFINMNITYRRFTSYAGGLFDYRPGCQELVKHKTAGIMMEHIEGLEVRNVEMRWENNELEQWNNPMEFKPSTVNNIHFSNFNSVVYSNSKSSQ 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02895 475 Pfam Glycosyl hydrolases family 28 120 391 IPR000743 GO:0004650|GO:0005975
Mepo3g02895 475 PANTHER PECTIN LYASE-RELATED 33 446 - -
Mepo3g02895 475 SUPERFAMILY Pectin lyase-like 18 389 IPR011050 -
Mepo3g02895 475 Gene3D - 23 399 IPR012334 -
Mepo3g02895 475 SMART pbh1 311 333 IPR006626 -
Mepo3g02895 475 SMART pbh1 257 278 IPR006626 -
Mepo3g02895 475 SMART pbh1 348 373 IPR006626 -
Mepo3g02895 475 SMART pbh1 204 230 IPR006626 -
Mepo3g02895 475 SMART pbh1 231 252 IPR006626 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02895 Mepo-Chr3 39103675 39106363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02895 23 469 Glycoside Hydrolase AT3G57790 64.114 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02895 - - gmx:100794954 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02895 3 39103675 39106363 Mepo3g02895 3 39103675 39106363 ECH