Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02846 ATGCTCCACAGTGGCACTCCCATTTCAATGGCCACCACCACATCACCTTACTGCATCCAACTCAGTGGCGTTACCGAGTCAACTCGTCCTCCAAAATCCACAACCACACGCAAGAAAAGCTCCAACGAAGTTGCATTCAAGGAGAAGAAGGATGGTTTCGTCGACTACGACAAAGGACACCACCAAGTTTCCACCAAAATATCCGGCCTCCGTAAAGAAGATATCCCCGCTCACTACCGCCGCCGTGTCGCCGGTAACCGCTTTCAAAAGGATTGGACCGTGTCGGAGGTCGTCGACTCCGTCCTCTCCCTCACTCTCCGTGACGACGTTGAAGGTCTGCTCAATCGTTGGATTGGTCGATTCGCTCGCAAGAATTTCCCTTTTCTCATTAGGGAGTTGACACAAAGAGGTTCAATTGAACACTGTAACTTAGTTTTCAGCTGGATGAAGAATCAGAAGAATTATTGTGCTAGAACAGATATATACAACATGATGATTAGGTTGCAAGCTAGGCATAATAGAACGGATCAGGCACGTGGTTTGTTTTTTGAGATGCAAAAATGCAGGTGTAAACCTGATGCTGAGACATACAATGCTCTTATTAATGCGCATGGTCGAGCTGGACAATGGCGTTGGGCTATGAATATTATGGATGACATGCTGCGTGCAGCTATCCCACCAAGTCGGTCAACTTACAACAACTTGATTAATGCTTGTGGATCTAGTGGAAATTGGAAAGAAGCACTTAATGTTTGCAAGAAAATGACTGACAATGGAGTTGGACCTGATCTTGTCACTCACAATATTATGTTAACTGCATTTAAAAGTGGCGCTCAGTATTCAAAAGCTTTGTCGTACTTTGAACTAATCAAGGGAACTCACATTCGCCCGGACACAACTACACACAATATCATTATCCATTGTCTAGTGAAGCTTAAACAATACGACAAAGCCGTTGATATTTTTAATTCCATGAAGGAAAAGAAGTCAGAATGTCACCCTGACGTTGTAACATTCACTAGTATCATTCATTTGTATTCTGTGTGTGGACACATTGAAAATTGTGAGTCTGCATTCAATATGATGCTTGCAGAAGGGCTGAAACCAAATATAGTCTCATACAATGCACTACTAGGTGCATATGCTGCTCGTGGGATGGAAAATGAGGCACTTCAGGTTTTTAATGAGATAAAACAAAATGGTTTCCGTCCAGATATTGTATCTTATACATCTTTACTTAATGCTTATGGAAGATCACGAAAACCCCAAAAAGCAAGGGAAATATTCAAAATGATAAAGAGAAACAACTTGAAGCCAAACATTGTCAGTTACAATGCACTAATTGATGCCTATGGGTCTAATGGTTTGCTTGAAGATGCAATTGAAATCTTGCGAGAAATGGAACAAGATAAGATTCATCCGAATGTTGTCTCAATATGCACACTCTTGGCTGCTTGTGGGCGGTGTGGTCAAAAGGTGAAAATTGATACTGTGCTGTCAGCGGCTGAGATGCGAGGCATTAAATTGAACACAGTTGCATATAATTCAGCTATAGGAAGCTATATTAATGTGGGGGAATATGACAAGGCTATTGACTTGTATAACTCTATGAGGAAGAAAAAAATAAAATCTGATTCTGTTACTTACACCGTCTTGATAAGTGGTTGTTGTAAGATGTCAAAATTTGGGGAAGCCCTGTCTTTTATGGAAGAAATGATGCATCTAAAACTTCCTATGTCCAAAGAGGTCTACTCATCTGTCATATGTGCCTATAGCAAACAGGGTCAAATCATAGAAGCAGAGTCTACATTCAACTTGATGAAATCATCGGGTTGCAGTCCAGATGTGGTTACATATACTGCAATGCTTGATGCCTACAATGCAGCCGAGAAGTGGGAGAAATTATATGCACTATTTGAAGAAATGGAAGAAAATGACGTCAAGCTAGATACCATCGCATGTGCAGCTCTAATGAGAGCTTTTAACAAAGGTGGCCAACCAGGAAGGGTCCTTAGTCTTGCACAAAGTATGAGAGAAAAAGACATTCCTTTAAGTGATACCATATATTTTGAAATGGTATCTGCCTGTAGCTTATTACATGATTGGAAGACAGCTGTTGATATGATCAAGTACATGGAGCCCTCACTTCCTGTAATTTCATCTGGGTGTTTAAATCTGCTCCTTAATTCTTTAGGAAAAAGTGGAAAAATTGAGATTATGTTGAAGCTATTCTTCAAAATGTTGGCATCTGGTGCTGAAGTTAACTTCAATACTTATTCTATTTTATTGAAAAACCTTTTATCATCTGGAAATTGGAGGAAGTATTTAGAGGTACTACAATGGATGGAGGATGCAGGAATTCATCCCTCAAATGAAATGTACCGTGATATATCCTCTTTTTCACAAAAAAACTGTGGGGCTGAAAATGCTGCTGTCATAAAAGAAAGACTTGAATCCTTGAAAAGAAATGTTGGGGATCAAATTTCTACAAGCCAACCTTGCGAATCTCATGTGCTTAGCTGA 2523 0.4023 MLHSGTPISMATTTSPYCIQLSGVTESTRPPKSTTTRKKSSNEVAFKEKKDGFVDYDKGHHQVSTKISGLRKEDIPAHYRRRVAGNRFQKDWTVSEVVDSVLSLTLRDDVEGLLNRWIGRFARKNFPFLIRELTQRGSIEHCNLVFSWMKNQKNYCARTDIYNMMIRLQARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGAQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSIIHLYSVCGHIENCESAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDIVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSVICAYSKQGQIIEAESTFNLMKSSGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQPGRVLSLAQSMREKDIPLSDTIYFEMVSACSLLHDWKTAVDMIKYMEPSLPVISSGCLNLLLNSLGKSGKIEIMLKLFFKMLASGAEVNFNTYSILLKNLLSSGNWRKYLEVLQWMEDAGIHPSNEMYRDISSFSQKNCGAENAAVIKERLESLKRNVGDQISTSQPCESHVLS 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02846 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 193 227 IPR002885 -
Mepo3g02846 840 Gene3D Tetratricopeptide repeat domain 328 398 IPR011990 GO:0005515
Mepo3g02846 840 Gene3D Tetratricopeptide repeat domain 253 327 IPR011990 GO:0005515
Mepo3g02846 840 Gene3D Tetratricopeptide repeat domain 471 573 IPR011990 GO:0005515
Mepo3g02846 840 Gene3D Tetratricopeptide repeat domain 399 470 IPR011990 GO:0005515
Mepo3g02846 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 405 439 IPR002885 -
Mepo3g02846 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 510 544 IPR002885 -
Mepo3g02846 840 Gene3D Tetratricopeptide repeat domain 574 686 IPR011990 GO:0005515
Mepo3g02846 840 PANTHER OS03G0856100 PROTEIN 33 499 - -
Mepo3g02846 840 MobiDBLite consensus disorder prediction 23 40 - -
Mepo3g02846 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 755 789 IPR002885 -
Mepo3g02846 840 Gene3D Tetratricopeptide repeat domain 687 812 IPR011990 GO:0005515
Mepo3g02846 840 Gene3D Tetratricopeptide repeat domain 104 241 IPR011990 GO:0005515
Mepo3g02846 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 228 262 IPR002885 -
Mepo3g02846 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 440 474 IPR002885 -
Mepo3g02846 840 Pfam PPR repeat family 297 343 IPR002885 -
Mepo3g02846 840 Pfam PPR repeat family 192 239 IPR002885 -
Mepo3g02846 840 Pfam PPR repeat family 583 626 IPR002885 -
Mepo3g02846 840 Pfam PPR repeat family 510 558 IPR002885 -
Mepo3g02846 840 NCBIfam pentatricopeptide repeat 161 194 IPR002885 -
Mepo3g02846 840 NCBIfam pentatricopeptide repeat 301 330 IPR002885 -
Mepo3g02846 840 NCBIfam pentatricopeptide repeat 583 616 IPR002885 -
Mepo3g02846 840 NCBIfam pentatricopeptide repeat 407 441 IPR002885 -
Mepo3g02846 840 NCBIfam pentatricopeptide repeat 512 545 IPR002885 -
Mepo3g02846 840 NCBIfam pentatricopeptide repeat 372 406 IPR002885 -
Mepo3g02846 840 NCBIfam pentatricopeptide repeat 196 228 IPR002885 -
Mepo3g02846 840 NCBIfam pentatricopeptide repeat 337 371 IPR002885 -
Mepo3g02846 840 NCBIfam pentatricopeptide repeat 442 476 IPR002885 -
Mepo3g02846 840 NCBIfam pentatricopeptide repeat 231 263 IPR002885 -
Mepo3g02846 840 NCBIfam pentatricopeptide repeat 617 651 IPR002885 -
Mepo3g02846 840 NCBIfam pentatricopeptide repeat 547 577 IPR002885 -
Mepo3g02846 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 545 579 IPR002885 -
Mepo3g02846 840 FunFam Pentatricopeptide repeat-containing protein At2g41720 663 840 - -
Mepo3g02846 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 158 192 IPR002885 -
Mepo3g02846 840 FunFam Os07g0213300 protein 275 389 - -
Mepo3g02846 840 Pfam PPR repeat 161 190 IPR002885 -
Mepo3g02846 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 370 404 IPR002885 -
Mepo3g02846 840 MobiDBLite consensus disorder prediction 23 42 - -
Mepo3g02846 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 580 614 IPR002885 -
Mepo3g02846 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 615 649 IPR002885 -
Mepo3g02846 840 Pfam Pentatricopeptide repeat domain 393 454 IPR002885 -
Mepo3g02846 840 Pfam Pentatricopeptide repeat domain 638 682 IPR002885 -
Mepo3g02846 840 Pfam Pentatricopeptide repeat domain 456 487 IPR002885 -
Mepo3g02846 840 Pfam Pentatricopeptide repeat domain 743 791 IPR002885 -
Mepo3g02846 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 335 369 IPR002885 -
Mepo3g02846 840 FunFam Predicted protein 403 518 - -
Mepo3g02846 840 SUPERFAMILY HCP-like 227 442 - -
Mepo3g02846 840 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 298 332 IPR002885 -
Mepo3g02846 840 FunFam Pentatricopeptide repeat-containing protein At2g41720 96 256 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02846 442 823 Glycosyltransferase AT1G05670 22.454 5.05e-18 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02846 - - gmx:100814643 1422.53