Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02829 ATGGTGGGAAGTATTTTGGGAAATGGATCATCTCAGAATCATAATAATGGATTAGAGGAGAAGCTTGATGAGTTTAGGAGACTAATTGGTAAAACTAATGGTGATCCATTAAGAATTGTGTGTATTGGAGCAGGTGCTTGGGGAAGTGTTTTTGCAGCACTTTTACAAGACAGTTATGGTCAATTTAGAGACAAAGTACAGATCAGAATATGGAGAAGACCAGGTAGAGCAATTGATAGATCAACAGCTGAACATCTCTTCGATGTGATCAATTCAAGAGAAGATGTTTTAAGAAGGTTGATAAGACGTTGTGCTTATCTAAAATATGTTGAAGCAAGACTTGGTGATAGGACACTTTATGCTGATGAGATTCTTAAAGATGGTTTTTGTTTGAATATGATTGATACTCCTGTTTGTCCTTTGAAAGTTGTTACTAATTTGCAAGAAGCTGTTTGGGATGCTGATATTGTTGTTAATGGTTTGCCTTCAACCGAAACTCGTGAGATTTTCGAAGAGATTAGTAAGTATTGGAAGGAGAGAATTAGCGTTCCTGTTATAATCTCTTTGTCTAAAGGTATTGAAGCTGCATTGGAGCCTGTTCCTCATATTGTAACTCCCACAAAAATGATTCATCAAGCAACTGGAGTGCCTATGGAGAACATACTTTATCTTGGTGGTCCAAATATTGCTTCAGAAATCTACAACAAGGAGTATGCCAATGCTAGAATTTGTGGAGCTGAGAAATGGAGGAAACCTTTAGCAAAGTTTCTTAGACAACCACATTTCATTGTATGGGACAATAGTGACCTTGTCACACATGAGGTCATGGGTGGATTGAAAAATGTCTATGCAATTGGAGCTGGAATGGTAGCATCCCTTACCAATGAGAGTGCTACTAGCAAATCTGTATACTTTGCACATTGTACTTCAGAGATGATATTCATCACTCACCTGTTAACTGAAGAGCCTGAGAAACTTGCTGGACCATTACTAGCTGATACTTATGTGACATTGTTAAAAGGTCGTAACGCGTGGTACGGTCAAATGTTAGCTAAAGGTGAACTAAGCCCTGACATGGGTGACAGCATTAGTGGCAAAGGAATGATTCAGGGAGTGTCTGCAGTAGAAGCATTCTTTGAGCTTTTGAGCCAATCAAGCCTAAATGTATTGCATCCTGAAGAAAAAAAGCATGTTGCTCCTGTTGAACTTTGCCCTATCTTGAAGACACTCTACAAAATATTGATATCCAGGGAACAATCAACACATGCAATTCTAAAAGCTTTGAGGGATGAAAATCTGAATGATCCAAGAGAACGCATTGCAATTGCACAAAGTCATGCTTTCTACAGGCCTTCACTTCTTGGACAACAGTGA 1374 0.3872 MVGSILGNGSSQNHNNGLEEKLDEFRRLIGKTNGDPLRIVCIGAGAWGSVFAALLQDSYGQFRDKVQIRIWRRPGRAIDRSTAEHLFDVINSREDVLRRLIRRCAYLKYVEARLGDRTLYADEILKDGFCLNMIDTPVCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERISVPVIISLSKGIEAALEPVPHIVTPTKMIHQATGVPMENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVASLTNESATSKSVYFAHCTSEMIFITHLLTEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGELSPDMGDSISGKGMIQGVSAVEAFFELLSQSSLNVLHPEEKKHVAPVELCPILKTLYKILISREQSTHAILKALRDENLNDPRERIAIAQSHAFYRPSLLGQQ 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02829 457 Gene3D - 19 100 - -
Mepo3g02829 457 Gene3D - 269 429 IPR013328 GO:0016491
Mepo3g02829 457 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 19 100 - -
Mepo3g02829 457 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 262 286 IPR006168 GO:0006072|GO:0009331|GO:0047952
Mepo3g02829 457 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 41 58 IPR006168 GO:0006072|GO:0009331|GO:0047952
Mepo3g02829 457 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 269 420 IPR008927 -
Mepo3g02829 457 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 37 269 IPR036291 -
Mepo3g02829 457 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 269 429 - -
Mepo3g02829 457 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 35 431 - -
Mepo3g02829 457 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 141 243 IPR011128 GO:0016616|GO:0046168|GO:0051287
Mepo3g02829 457 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 131 265 - -
Mepo3g02829 457 Gene3D - 131 265 - -
Mepo3g02829 457 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 269 421 IPR006109 GO:0005975|GO:0047952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02829 Mepo-Chr3 38300123 38303382 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02829 1 456 Acyl Lipid Metabolism Gene Families AT2G41540 86.985 0.0 816
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02829 K00006 - gmx:100810871 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02829 3 38300123 38303382 Mepo3g02829 3 38300123 38303382 ECH