Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02778 ATGGCGACTGAAAATGGAGGAGGACAAAACGGAACCACCGAAACAGCAATAACAATGATGGAGATCGAAAACGGAGATACAACAACACAACCACAAGTACAAGAACAACCTAAGTGTTTGTTCACCAAGATGGACAATGGAAGCATTGAGAGTCATCGTTACTACTTATCTCGCAGAACTGTTCTTGAGATGCTCAAAGACAGAGGCTACTCTATCCCCTCTGATGAAATTCAGCTCTCTCTTGATGATTTCCGCCAAATTCATGGTCAATCTCCTGATGTTGATCGTCTCCGCTTTACTGCTACTCATGCCACTAACCCTTCCAAAAGGATTTTGGTGGTTTTTAGTGGGCCAGGGATAGTGAAAGTGAATGGGGTAAGAGACATAGCAGGACAGATTGTGAATAGAGAGAGTTTGACTGGTCTTATTTTGATTGTGCAAAATCAAATTACTAGTCAAGCTTTGAAAGCTGTTAATCTTCTCTCTTTCAAAGTTGAAATTTTTCAGATCACAGACTTGCTTGTTAATGCTACAAAGCATGTATTGAAGCCAAAGCATCAGGTGTTGACTGATAAGCAGAAAAAGAATCTCCTGAAGAAGTACGATATACAAGAAAAGCAGCTTCCCCGAATGCTACAGACAGATGCAATTGCTCGATATTACGGACTTCAGAGGGGGCAGGTAGTTAAAGTTACCTACACCGGTGAAATCACCCAGATGCATGTTACCTATCGATGCGTATGGTGA 747 0.4163 MATENGGGQNGTTETAITMMEIENGDTTTQPQVQEQPKCLFTKMDNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRLRFTATHATNPSKRILVVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALKAVNLLSFKVEIFQITDLLVNATKHVLKPKHQVLTDKQKKNLLKKYDIQEKQLPRMLQTDAIARYYGLQRGQVVKVTYTGEITQMHVTYRCVW 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02778 248 FunFam DNA-directed RNA polymerases I, II, and III subunit RPABC1 173 248 - -
Mepo3g02778 248 SUPERFAMILY RPB5-like RNA polymerase subunit 173 248 IPR035913 -
Mepo3g02778 248 Pfam RNA polymerase Rpb5, C-terminal domain 175 247 IPR000783 GO:0003677|GO:0003899|GO:0006351
Mepo3g02778 248 SUPERFAMILY Eukaryotic RPB5 N-terminal domain 48 176 IPR036710 GO:0003677|GO:0003899|GO:0006351
Mepo3g02778 248 PIRSF RPB5 43 248 IPR014381 GO:0003899
Mepo3g02778 248 Gene3D - 173 248 IPR035913 -
Mepo3g02778 248 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 49 248 IPR014381 GO:0003899
Mepo3g02778 248 Pfam RNA polymerase Rpb5, N-terminal domain 50 132 IPR005571 GO:0003677|GO:0003899|GO:0006351
Mepo3g02778 248 Gene3D - 45 172 IPR036710 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02778 Mepo-Chr3 37684166 37688607 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02778 K03013 - gmx:100306033 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02778 3 37684166 37688607 Mepo3g02778 3 37684166 37688607 ECH