Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02774 ATGATAAAAATGGATACTTTACTCAAAACACCAAACAAGCTTCAATTTTTACACCCACTACATGGTTATTCAGAAAAATTGAGTCATTTTTCAGCTTCAGATAAGTTGCAAAACCATGTAGTTAGATTTGGTTCAAAGAAAAAACCAGTTTTAAGGGCTAGTAGCAGTGCCCTTTTGGAGCTTGTTCCTGAATTCAAGAAGGAGAATTTGGATTTTGAACTTCCTTTGTATGATTCAACAAAGGGTACTGTTGTGGATCTTGTAGTTGTTGGAGGTGGTCCTGCAGGACTTGCTGTAGCACAACAAGTTTCTGAAGCAGGGCTTTCTGTTTGTGCTATTGATCCAAATCCTAGATTGATTTGGCCTAATAATTATGGTGTTTGGGTGGATGAATTTGAGGCCATGGATTTGCTTGATTGTCTTGATAAAACTTGGTCTGGTGCTGTTGTTTATATCGACGATAAAACGAAAAAGGATCTTGATAGACCTTATGGTAGGGTTAATAGGAAGCTTTTGAAATCAAAGATGCTGCAGAAATGTATTTCAAATGGCGTTAAGTTTCATCAAGCTAAAGTTATCAAGGTCATTCATGAGGAATCCAAATCGATGTTGATTTGTAATGATGGTGTCACAGTTCAGGCTACTGTTGTTCTTGATGCTACTGGCTTCTCGAGATGTCTAGTCCAGTATGATAAACCGTATAATCCGGGTTACCAGGTTGCGTACGGGATTTTGGCTGAGGTTGAAGAACACCCGTTTGACGTTGATAAAATGCTTTTTATGGACTGGAGAGATTCACATCTAGACAATGACTTGAAGCTCAAGGAGAGAAATAGTAAAATACCTACATTTCTGTATGCAATGCCCTTTTCTTCAACCAAGATATTTCTCGAAGAAACCTCTCTTGTAGCGCGTCCTGGGTTACGGATGGATGATATACAGGACAGAATGGTTGCTAGATTGAAACATTTGGGGATTAATGTGAAAAGCATTGAAGAGGATGAGCAGTGTGTGATTCCCATGGGTGGCCCTCTCCCAGTTCTCCCTCAAAGAGTTGTTGGAATCGGCGGTACAGCCGGGATGGTGCATCCTTCAACCGGGTATATGGTAGCAAGAACCCTTGCTGCAGCTCCAATTGTTGCTAATGCTATTGTTCAATATCTTGGTTCTGATAGAGGCCTTTTAGGAGACGAAGTATCTGCACGAGTATGGAAAGACTTATGGCCAATCGAAAGGAGACGACAAAGGGAGTTCTTCTGTTTTGGTATGGACGTCTTACTCAAGCTTGATTTACCTGGCACAAGGAGATTTTTCGATGCATTTTTTAATCTGGAACCTCATTATTGGCATGGATTCTTATCATCAAGACTGTATCTTCCTGAGCTCTTTACTTTTGGTTTGTCTCTATTTTCTTATGCTTCAAATACATCTAGGCTAGAGATAATGGCTAAGGGAACTCTTCCTTTGGTAAATATGGTCAACAATTTGATACAAGATAAAGAATAA 1506 0.3971 MIKMDTLLKTPNKLQFLHPLHGYSEKLSHFSASDKLQNHVVRFGSKKKPVLRASSSALLELVPEFKKENLDFELPLYDSTKGTVVDLVVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDKTWSGAVVYIDDKTKKDLDRPYGRVNRKLLKSKMLQKCISNGVKFHQAKVIKVIHEESKSMLICNDGVTVQATVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDVDKMLFMDWRDSHLDNDLKLKERNSKIPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQDRMVARLKHLGINVKSIEEDEQCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVQYLGSDRGLLGDEVSARVWKDLWPIERRRQREFFCFGMDVLLKLDLPGTRRFFDAFFNLEPHYWHGFLSSRLYLPELFTFGLSLFSYASNTSRLEIMAKGTLPLVNMVNNLIQDKE 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02774 501 NCBIfam lycopene cyclase family protein 86 481 IPR010108 GO:0016117|GO:0016705
Mepo3g02774 501 PANTHER - 42 496 - -
Mepo3g02774 501 Pfam Lycopene cyclase protein 86 478 - -
Mepo3g02774 501 SUPERFAMILY FAD/NAD(P)-binding domain 84 467 IPR036188 -
Mepo3g02774 501 Gene3D - 82 429 IPR036188 -
Mepo3g02774 501 FunFam lycopene epsilon cyclase, chloroplastic 82 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02774 Mepo-Chr3 37662917 37665257 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02774 K06443 - gmx:100810895 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02774 3 37662917 37665257 Mepo3g02774 3 37662917 37665257 ECH