Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02751 ATGTGGGCTCTTCGTCGAGTTTCCTTACCTCTCAGGAATAAAGGTTTTAATGTTAGGGTTTCTTGTGTGAAATTATTGCCAAATACTTGTGTTGAAAATGAGGCTGGAGTTTTTGATTCTCCCAAAATGGTTTGTGCTAAGTGTGGATTTTCATCGACGAATCGATGTTATTGTTCGGGTTCGGATTCAGGACATGGTTTTTTTAAATTTAGTTTGGGTAGATTAGGGTTTTCTTCGGAAGCTGGTGCTAAAACTACGAAAGAGGAGGATGATGATTTGGAGGAAGGGTTTTCGGAGCTGGAGACGCCGCTGGGTGAGGAAAGTGAAAAAAGGGTAGTTTCTGATAGTGAAGATTCTGGTGAGAGTGATGAATCGGAAATTGCGGGGGCACATAATGAGCTGGAGTTACCGTTATCGCATGATGCTGATGAGGTATCAACGGGGAAGAGGTCAAGTAGAAAGAGGGCTGATTCAGAACTTTTTAAGGCTATTATGAATGGTACGGGGCCTACTATTCATACGGCTTTGGAAAAGTGGGTTGAAGATGGGAAAGGATTGAGCAGAGAGGAGATTTCGCTGGCTATGGTTAATTTCCGGAGGCTGAAGATTTATGGGAAAGCTTTGCAGCTCTCAGAGTGGCTCGAGTCGGAGAAGCATCTTGAATTCTTTGAAAGGGATTATGCTTCCCAACTTGATTTAATTGCCAAATTGCATGGCCTACATAAGGCAGAAGTTTACATTGAGAAAATTCCAGAATCCTTTAGAGGGGAGATAATATACCGAACTTTATTGGCTAACTGTGTTACTCAGAACAATTTGAAGAAAGCAGAGGAAATTTTTAATAAAATGAAGGATTTAGAGTTTCCTCTTACACCATTTGCATGTAATCAGTTGCTCCTTCTGTATAAGAGGACTGACAAAAAGAAAATAGCTGATGTGTTATTGCTGATGGAACAAGAGAATGTCAAACCTTCTCCTCTGACTTTTAAGATCTTAATAGATGTAAAAGGCCAGTCCAATGATATTAATGGAATGGATCAAATTGTTGATCAAATGAGGGCTGAGGGTATTGAACCGGACAACTATACAAAGGCAGTTTTGGTTGGGCATTACATCTCAGGCGGGCATGATGATAAAGCTAAAACGTTGTTGAAGGAGATGGAAGGTGAAAACTTGAAGGAGAATCGGTGGGTCTGTCGACTTTTGCTTGCTCTCTATGCAAAGTTGGGAATGGCCGATGAAGTGGGAAGAGTTTGGAAGGTCTGTGAGACACGCCCTTCAGTTGAGGATTGTGTAGCTGCAATTGAAGCCTGGGGAAAGTTGAAGAAAATTGATGAAGCAGAGGCAGTTTTTGAGGTGATGGCAAGAAAATGGAAGCTTACGTCCAAGAACTGCTCAGTACTACTGAATGTTTATGCAAACAACAAGATGCTAACGAAGGGCAAGGATCTTATTAAGCGAATGGCAGATAAAGGATGTCGAATAGGCCCGCTGACCTGGAATGCATTAGTGAAACTTTATGTCCAAGCAGGGGAAGTGGAAAAGGCTGACAGTGTTCTGCAGAAGGCAATCCTGCAGAGTCCAGTGAGGCCAATATTTTCTTCCTATAACACTCTTCTTGAGGAGTATTCTAAGAGGGGTGACATCCATAATTCGGAAAAGATCTTCTACAGAATGAAACAGGCTGGTTATATATCTCGACCAAAGCAGTACCAAATTCTTATAGAGGCATATAGGAGGGCCAATGTTCCAGCTTATGGGATTAGGGACAGGTTGAAAGCAGATAATGTATTTCCCAACAAAACTTTGGCTAACTTGTTGGTTCAAGTTGATGGATTTAAGAAGACTCAAGCTTCCGATTTGCTTGATTGA 1872 0.4161 MWALRRVSLPLRNKGFNVRVSCVKLLPNTCVENEAGVFDSPKMVCAKCGFSSTNRCYCSGSDSGHGFFKFSLGRLGFSSEAGAKTTKEEDDDLEEGFSELETPLGEESEKRVVSDSEDSGESDESEIAGAHNELELPLSHDADEVSTGKRSSRKRADSELFKAIMNGTGPTIHTALEKWVEDGKGLSREEISLAMVNFRRLKIYGKALQLSEWLESEKHLEFFERDYASQLDLIAKLHGLHKAEVYIEKIPESFRGEIIYRTLLANCVTQNNLKKAEEIFNKMKDLEFPLTPFACNQLLLLYKRTDKKKIADVLLLMEQENVKPSPLTFKILIDVKGQSNDINGMDQIVDQMRAEGIEPDNYTKAVLVGHYISGGHDDKAKTLLKEMEGENLKENRWVCRLLLALYAKLGMADEVGRVWKVCETRPSVEDCVAAIEAWGKLKKIDEAEAVFEVMARKWKLTSKNCSVLLNVYANNKMLTKGKDLIKRMADKGCRIGPLTWNALVKLYVQAGEVEKADSVLQKAILQSPVRPIFSSYNTLLEEYSKRGDIHNSEKIFYRMKQAGYISRPKQYQILIEAYRRANVPAYGIRDRLKADNVFPNKTLANLLVQVDGFKKTQASDLLD 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02751 623 FunFam Pentatricopeptide repeat-containing protein, mitochondrial 256 431 - -
Mepo3g02751 623 FunFam Pentatricopeptide repeat-containing protein, mitochondrial 432 617 - -
Mepo3g02751 623 MobiDBLite consensus disorder prediction 81 154 - -
Mepo3g02751 623 NCBIfam pentatricopeptide repeat 499 522 IPR002885 -
Mepo3g02751 623 NCBIfam pentatricopeptide repeat 259 289 IPR002885 -
Mepo3g02751 623 NCBIfam pentatricopeptide repeat 535 563 IPR002885 -
Mepo3g02751 623 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 496 531 IPR002885 -
Mepo3g02751 623 Pfam PPR repeat 535 563 IPR002885 -
Mepo3g02751 623 Pfam PPR repeat 466 493 IPR002885 -
Mepo3g02751 623 Pfam PPR repeat 499 522 IPR002885 -
Mepo3g02751 623 Pfam Pentacotripeptide-repeat region of PRORP 260 419 IPR033443 -
Mepo3g02751 623 MobiDBLite consensus disorder prediction 103 154 - -
Mepo3g02751 623 Gene3D Tetratricopeptide repeat domain 256 429 IPR011990 GO:0005515
Mepo3g02751 623 Gene3D Tetratricopeptide repeat domain 430 620 IPR011990 GO:0005515
Mepo3g02751 623 PANTHER OS12G0527900 PROTEIN 78 602 - -
Mepo3g02751 623 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 532 566 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02751 Mepo-Chr3 37418476 37421917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02751 174 577 EF-hand Containing Proteins AT1G02150 26.139 9.17e-35 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02751 - - tpra:123891250 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02751 3 37418476 37421917 Mepo3g02751 3 37418476 37421917 ECH