Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02739 ATGAATAACATTGCCGGGAGACCACTTAATGGAGATTTAGAAGATGATGATGAAGATGAAGCTAATGACGATGGCTTAGAAGCGTGGGAGAGAGCTTATACAGAAGATAGATCATGGGAGTCTTTGCAGGAAGATGAATCTGGACTTCTTCGTCCCATAGATACGACAGCCATTCATCATGCCCAGTATCGTAGACGCCTCCATGCCCTTGCTTTAAATGCAGCTACCGCGCGAATTCAAAAGGGTTTGATACGATACTTATACATTGTTGTGGACCTGTCCAAGGCAGCTTCAGAGAGGGACTTTCGACCAAGTAGAATGGCTGTGATTGCAAAGCAGGTTGAGTTATTTATCAGGGAGTTCTTTGATCAGAATCCACTTAGCCATGTTGGTTTGGTGACTACCAAAGATGGGGTTGCTAATTGCTTGACAGATCTTGGCGGCAGTCCTGAGTCACACATCAAAGCTTTGATGGGTAAACTAGAATGCTCAGGTGATGCCTCCCTACAAAATGCACTAGAACTTGTTCATAGCAATCTAAATCAAATCCCATCATATGGTCACCGAGAAGTTCTGATTTTATATTCGGCCCTCAGTACATGTGATCCTGGTGATCTCATGGAAACTATACAAAAATGCAAAAAGAGTAAAATAAGATGCTCGGTCATTGGTCTTGCTGCTGAAATGTTTATATGCAAGCATCTTTGCCAAGAAACTGGAGGAACGTATTCAGTTGCACTAGATGAGTCCCACTTTAAAGAGTTAATTCTTGAGCATTCTCCACCACCTCCAGCAATGGCAGAGTATGCTACGGCTAATTTGATTAAGATGGGTTTCCCGCAAAGAGCAGCTGAGGGTTCCGTTGCAATTTGTACATGTCATGAAGAGGCCAAAACTGGAGGGGGATATACTTGTCCAAGATGCAAAGTTCGTGTCTGTGAGCTTCCTACTGAATGCCGCGTCTGTGGATTGACCCTTATTTCTTCGCCCCATTTGGCAAGGTCATATCATCATCTCTTCCCCATAGTGCCATTTTCTGAGATCTCTCCATCATCTCAAAATGATCCAAGCCATAGTTTTCCCAATACTTGTTTTGGTTGTCAACAAAGTCTCCTTAGTCAGGGTTTTGGAGCAGGAAACAAGGCTGAACTTTCCGTCTCTTGCCCAAAATGCAAACAACAATTCTGCCTTGATTGTGACATGTACATTCATGAGAGCTTACATAATTGCCCAGGCTGTGAGAGCTTCAGGCATTCTAAGTCAGTTACTACTGCCCAATGA 1281 0.4348 MNNIAGRPLNGDLEDDDEDEANDDGLEAWERAYTEDRSWESLQEDESGLLRPIDTTAIHHAQYRRRLHALALNAATARIQKGLIRYLYIVVDLSKAASERDFRPSRMAVIAKQVELFIREFFDQNPLSHVGLVTTKDGVANCLTDLGGSPESHIKALMGKLECSGDASLQNALELVHSNLNQIPSYGHREVLILYSALSTCDPGDLMETIQKCKKSKIRCSVIGLAAEMFICKHLCQETGGTYSVALDESHFKELILEHSPPPPAMAEYATANLIKMGFPQRAAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRVCGLTLISSPHLARSYHHLFPIVPFSEISPSSQNDPSHSFPNTCFGCQQSLLSQGFGAGNKAELSVSCPKCKQQFCLDCDMYIHESLHNCPGCESFRHSKSVTTAQ 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02739 426 Gene3D von Willebrand factor, type A domain 80 265 IPR036465 -
Mepo3g02739 426 CDD vWA_transcription_factor_IIH_type 82 264 IPR007198 -
Mepo3g02739 426 PIRSF TFIIH_SSL1 7 416 IPR012170 GO:0000439|GO:0006289|GO:0006351
Mepo3g02739 426 SMART VWA_4 84 260 IPR002035 -
Mepo3g02739 426 SUPERFAMILY Cysteine-rich domain 337 414 IPR046349 -
Mepo3g02739 426 Pfam Ssl1-like 90 280 IPR007198 -
Mepo3g02739 426 ProSitePatterns Zinc finger C2H2 type domain signature. 388 408 IPR013087 -
Mepo3g02739 426 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 340 422 IPR013083 -
Mepo3g02739 426 PANTHER GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 20 419 - -
Mepo3g02739 426 NCBIfam transcription factor ssl1 302 415 IPR012170 GO:0000439|GO:0006289|GO:0006351
Mepo3g02739 426 FunFam General transcription factor IIH subunit 2 80 265 - -
Mepo3g02739 426 FunFam General transcription factor IIH subunit 340 421 - -
Mepo3g02739 426 ProSiteProfiles VWFA domain profile. 86 225 IPR002035 -
Mepo3g02739 426 SMART C1_4_2 363 415 IPR004595 GO:0006281|GO:0008270
Mepo3g02739 426 MobiDBLite consensus disorder prediction 1 25 - -
Mepo3g02739 426 SUPERFAMILY vWA-like 81 248 IPR036465 -
Mepo3g02739 426 Pfam TFIIH C1-like domain 363 415 IPR004595 GO:0006281|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02739 K03142 - gmx:100803090 759.214