Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02638 ATGGCCACTAACGAAAATCTTCCGCCTAATGTGATAAGGCAACTTGCCAAGGAGTTGAAAAATCTTGATGAAACCCCTCCTGAGGGCATTAAAGTTGTCGTGAATGATGATGATTTTTCAACAATTTTTGCTGACATTGAAGGCCCTGCTGCAACTCCTTATGAGAGTGGAGTTTTCCGCATGAAGTTGAAACTATCACATGATTTTCCACACTCTCCTCCTAAAGGATATTTCTTGACCAAGATTTTCCATCCAAATATTGCCAACAGTGGAGAGATTTGTGTCAACGCGCTCAAAAAGGATTGGAATCCTAGCCTTGGGTTACGGCATATTCTTATCGTTGTTAGGTGTCTATTGATTGAACCATTTCCAGAATCAGCTTTAAATGAACTGGCTGGTAAACTACTGCTCGAAAATTATGAGGAGTATGCTAGACATGCCAGGCTTTTAACCGGAATCCATGCAAAACCAAAGCCAAAATTCAAAAGTGGAGCTATAACCGAATCAACTACTGCTCTGAATGTTGATCAGACAAACACCTCAGTGCTTAATGCTGACAACAAAACCATGCCGTCAGGTGCTGCTTTGCCACCACTGTCATTGCCCTCAACCACTGGAGCAAGAGGAACTAGTCAGGATCAGGCAGTAGTGGGCGTTCTGACCGAGTCGTCTGCTAATGTTTCTTCTGCTGCCACGGTAGTTTCTGCTGCTCATGCACCACAAAAGAGGGACATTGGAACTGCTAAAGCTCAGGCAGACAAGAAGAAGCTAGATGCTAGAAAGAAAAGTTTGAAAAGATTGTGA 804 0.4316 MATNENLPPNVIRQLAKELKNLDETPPEGIKVVVNDDDFSTIFADIEGPAATPYESGVFRMKLKLSHDFPHSPPKGYFLTKIFHPNIANSGEICVNALKKDWNPSLGLRHILIVVRCLLIEPFPESALNELAGKLLLENYEEYARHARLLTGIHAKPKPKFKSGAITESTTALNVDQTNTSVLNADNKTMPSGAALPPLSLPSTTGARGTSQDQAVVGVLTESSANVSSAATVVSAAHAPQKRDIGTAKAQADKKKLDARKKSLKRL 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02638 267 CDD UBCc 12 151 IPR000608 -
Mepo3g02638 267 Gene3D Ubiquitin Conjugating Enzyme 4 157 IPR016135 -
Mepo3g02638 267 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 10 156 IPR000608 -
Mepo3g02638 267 SMART ubc_7 13 156 - -
Mepo3g02638 267 MobiDBLite consensus disorder prediction 185 212 - -
Mepo3g02638 267 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 13 156 - -
Mepo3g02638 267 FunFam Ubiquitin-conjugating enzyme E2 22 4 157 - -
Mepo3g02638 267 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 83 98 IPR023313 -
Mepo3g02638 267 MobiDBLite consensus disorder prediction 235 267 - -
Mepo3g02638 267 SUPERFAMILY UBC-like 5 159 IPR016135 -
Mepo3g02638 267 Pfam Ubiquitin-conjugating enzyme 15 148 IPR000608 -
Mepo3g02638 267 Coils Coil 247 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02638 Mepo-Chr3 36303969 36306809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02638 12 105 Miscellaneous Gene Families AT2G33770 28.125 1.28e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02638 K10583 - gmx:100801681 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02638 3 36303969 36306809 Mepo3g02638 3 36303969 36306809 ECH