Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02623 ATGGCCACCGTCCTCCGAACTCCCACATTCCGGCCATCTCCAACCCTTCTCACCACCGCCGCCTCCTCTTCCAATCACTCCAGAACCTCACGCGTTTCCGTCGCATCCTCCAGAAGAAGACCTTCACCACTTAAATCCCACCGGTTCCGTTCAATTCCCACCCCCCGGTTCGTCAAGTTAGTACCTTTTGCTTTTGACGGAGATACCGAGGCACCGCAAGTTCAAGATTCACCTGAGGTTCAGGTTCTGGATTCTACAGATGGTGCTGCTGATGTGGAGGAGAGTACAGGTGATGATGAGGTCAGCGATGCTGGTGAAATACCTGCTTCACCTCTGATAGTATTACTTCAGTCATACAAAGAAGCATTAGCTAATAATGATGCAGTCAAAGTTGCTGAGTTGGAATCATCATTAAAATCCATTGATGATGAGATAGTAGGTCTTGAAGGGAAAATAGCTTCCTTATCCGAAGAGTTATCAATAGAAAAAGATCGAAAACTAAGGATCGGTGCAGACTTTGACAATTATCGAAAGAGAACCGATAGAGATCGCCTTTCACTGGTCACAAATGCTCAGGGGGAAGTTGTGGAGAGTTTGTTGCCTGTATTGGATAATTTTGAGAGAGCTAAAGCTCAGATCAAGGTGGAGACAGAGGGAGAGGAGAAAATAAACAACAGCTATCAAAGCATATATAAGCAGTTCATTGAAATTCTAAACTCACTTGGAGTTGAGCCAGTGGATACGGTTGGAAATCCCTTTGATCCAATGCTACATGAAGCAATTATGCGTGAGGATTCAGATGAATTTGAAGATGGCATCATACTTCAAGAATTCAGAAAGGGTTTTAAACTTGGTGACCGCCTCTTACGTCCATCAATGGTGAAGGTATCAGCTGGTCCAGGACCTGCAAAGCCGGAACAAGAAGTACCACAGGAAGAAGAAGTCACCAATGAAACTTCCCAGGACAATAAAGATAATGATGGCAACACAGAAACAGAGTCTGCTTGA 1008 0.4474 MATVLRTPTFRPSPTLLTTAASSSNHSRTSRVSVASSRRRPSPLKSHRFRSIPTPRFVKLVPFAFDGDTEAPQVQDSPEVQVLDSTDGAADVEESTGDDEVSDAGEIPASPLIVLLQSYKEALANNDAVKVAELESSLKSIDDEIVGLEGKIASLSEELSIEKDRKLRIGADFDNYRKRTDRDRLSLVTNAQGEVVESLLPVLDNFERAKAQIKVETEGEEKINNSYQSIYKQFIEILNSLGVEPVDTVGNPFDPMLHEAIMREDSDEFEDGIILQEFRKGFKLGDRLLRPSMVKVSAGPGPAKPEQEVPQEEEVTNETSQDNKDNDGNTETESA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02623 335 MobiDBLite consensus disorder prediction 1 49 - -
Mepo3g02623 335 MobiDBLite consensus disorder prediction 69 105 - -
Mepo3g02623 335 FunFam GrpE protein homolog 124 240 - -
Mepo3g02623 335 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 146 242 IPR013805 -
Mepo3g02623 335 Gene3D - 126 240 IPR013805 -
Mepo3g02623 335 MobiDBLite consensus disorder prediction 307 335 - -
Mepo3g02623 335 FunFam Protein GrpE 242 297 - -
Mepo3g02623 335 Pfam GrpE 137 297 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Mepo3g02623 335 Coils Coil 131 158 - -
Mepo3g02623 335 PRINTS GrpE protein signature 195 210 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Mepo3g02623 335 PRINTS GrpE protein signature 277 296 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Mepo3g02623 335 PRINTS GrpE protein signature 250 265 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Mepo3g02623 335 PRINTS GrpE protein signature 167 183 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Mepo3g02623 335 CDD GrpE 163 296 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Mepo3g02623 335 ProSitePatterns grpE protein signature. 253 296 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Mepo3g02623 335 Hamap Protein GrpE [grpE]. 75 298 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Mepo3g02623 335 PANTHER GRPE PROTEIN 16 298 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Mepo3g02623 335 Gene3D Head domain of nucleotide exchange factor GrpE 242 297 IPR009012 GO:0006457
Mepo3g02623 335 MobiDBLite consensus disorder prediction 293 335 - -
Mepo3g02623 335 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 243 299 IPR009012 GO:0006457
Mepo3g02623 335 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02623 Mepo-Chr3 36184123 36188737 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02623 K03687 - gmx:100820521 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02623 3 36184123 36188737 Mepo3g02623 3 36184123 36188737 ECH