Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02622 ATGGAATCAAGCGTTTTAGAAAGCATCGGCGTAGAGATAATCGGAGTAATGTCACCAGTTTCAATCTGCATGTTCCTCGTCGTTCTCCTCGTCTACACTCTCTCCACCACCTCCTCACCGGAAACCACCTTCACCACCGCCGCTAATCTCGTCTACGCTGAAAACCCCTCCGACACCACCGCACATAAACTCGAAGGCGCACTTCTCAACGCCGTCGTCTTCGTCATCCTCATCGCCATCGTCACCTTCCTTCTCGTCCTCCTCTACTACTACAACTGCACCGCCTTCCTCCGTAACTATGTCCGCTTCTCCGCCTTCTTCGTCCTCGCTACCATGGGTGGATCCATCTTCATCAACCTAATCGAACGCTTCTCAATTCCGTTAGATTCAATTACTTTTTTCGTTTTTCTCTTCAATTTCACTATTGTTGGTGTTCTTTCGGTTTTCGCGCAAGCGATTCCGATTATTGTTCGTCAGTGTTATATGGTTTGTCTTGGGATTTTCGTTGCTGCGTGGTTTACGAAGCTTCCGGAATGGACCACATGGACGCTTCTTGTTGCTCTTGCTCTTTATGATCTTGTTGCTGTTTTAGCTCCTGGTGGTCCTTTGAAGCTCCTTGTTGAATTGGCTTCCAGCCGGAACGAGGAGCTTCCTGCTTTGATTTATGAAGCTCGCCCTACCGTTGCTCCTAATGGTAGGGCCGCTGCTTTAGGGCTTTTCGTCGCCGGTGTTTCTGAAGCTCAGTCGACTCAATCGTCTTCCATTGAGCTTCAGGAACTTCAGGTGGTTCCCATAGTGAATATGAATGAACGTGATAATGATATTCATATTCAAGGAGGCGGTGGTGATGATTCTGTTGCTGGGGTTGAGGATCTTCAGAATGATGAAGGGGAAAGGTCACCATTGGTTGGAAATAACGGGAATCGGGAAGAAGAAAGGTCTCCACTTGTTGAGGTGATGGGGAATGAGAGGAGAGAACCCAGGGAAAGAGAGGAAATTGCTGAGAGAGGGATTAAGCTTGGACTTGGTGATTTTGTGTTCTACAGTGTTCTTGTGGGAAGAGCTGCAATGTATGATCTTATGACCGTTTATGCTTGTTACCTTGCAATTATATCTGGACTTGGATGCACTCTTATATTGCTCTCGGTTTGTCGTCATGCTTTGCCGGCTCTTCCGATTTCGATCGCGTTGGGTGTGATTTTCTATTTCTTGACTAGATTGTTGATGGAGCCTTTTATTGTTGGGACTGCTACAAATTTGATGATGTTTTGA 1272 0.467 MESSVLESIGVEIIGVMSPVSICMFLVVLLVYTLSTTSSPETTFTTAANLVYAENPSDTTAHKLEGALLNAVVFVILIAIVTFLLVLLYYYNCTAFLRNYVRFSAFFVLATMGGSIFINLIERFSIPLDSITFFVFLFNFTIVGVLSVFAQAIPIIVRQCYMVCLGIFVAAWFTKLPEWTTWTLLVALALYDLVAVLAPGGPLKLLVELASSRNEELPALIYEARPTVAPNGRAAALGLFVAGVSEAQSTQSSSIELQELQVVPIVNMNERDNDIHIQGGGGDDSVAGVEDLQNDEGERSPLVGNNGNREEERSPLVEVMGNERREPREREEIAERGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRHALPALPISIALGVIFYFLTRLLMEPFIVGTATNLMMF 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02622 423 PANTHER PRESENILIN 2 423 IPR001108 GO:0004190|GO:0016020|GO:0016485
Mepo3g02622 423 MobiDBLite consensus disorder prediction 294 315 - -
Mepo3g02622 423 Gene3D Presenilin 317 414 IPR042524 -
Mepo3g02622 423 FunFam Presenilin 317 414 - -
Mepo3g02622 423 Pfam Presenilin 10 413 IPR001108 GO:0004190|GO:0016020|GO:0016485
Mepo3g02622 423 SMART psh_8 65 409 IPR006639 GO:0004190|GO:0016020
Mepo3g02622 423 PRINTS Presenilin family signature 192 209 IPR001108 GO:0004190|GO:0016020|GO:0016485
Mepo3g02622 423 PRINTS Presenilin family signature 17 27 IPR001108 GO:0004190|GO:0016020|GO:0016485
Mepo3g02622 423 PRINTS Presenilin family signature 175 182 IPR001108 GO:0004190|GO:0016020|GO:0016485
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02622 Mepo-Chr3 36170844 36174913 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02622 1 423 Miscellaneous Gene Families AT1G08700 62.987 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02622 K04505 - gmx:100819461 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02622 3 36170844 36174913 Mepo3g02622 3 36170844 36174913 ECH