Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02618 ATGGCGCTATCATCGTCATCTTCAGCATCATGTTCATGTTTTTCACCTTCTACAACAATTCTACCTCCTTCTCTTCCTTTCACTACTCAATTCCATCGTAACGTCCGTTTCCGGCGAGCAATTGCCGCCACCGCCACAGTTTCCACTACATCTTCTACTCCGCCGCTCTTCTCTACCACCAGAGAAGGACTTGACGCCGTTAACATTGCCGAAGATGTCACCCAGTTGATTGGAAATACACCGATGATATATCTGAATAAAGTTACAGATGGATGTGTAGCAAATGTTGCTGCAAAACTTGAATCCATGGAACCTTGCAGAAGCGTCAAGGATAGAATTGGCTATAGCATGTTAGCTGATGCTGAAGAGAGTGGAGCGATTTCTCCAGGGAAGACTGTTTTAGTTGAACCTACAACTGGAAATACGGGACTTGGCCTTGCTTTTGTTGCCGCAACGAAAGGTTATAAACTGATAGTCACAATGCCTGCTTCTGTTAATATTGAGAGGAGAATCCTTTTACGCACATTTGGTGCAGAGGTTGTTTTGACGAATGCGGAGAAGGGGCTGAAAGGGGCTGTTGACAAAGCTGAAGAAATTGTCTATGCCACACCCAATGCTTACATGTTTCGACAGTTTGATAACAGGAATAACACAAAGATCCACTTCGAAACTACAGGGCCAGAGATATGGGGGGATACAATGGGTAATGTTGATTTATTGGTTGCTGCTATTGGAACTGGCGGCACTATTACAGGAACTGGACAATATCTGAAATTGATGAACAAAAAAATAAAGGTGGTTGGGGTGGAACCTGCAGATAGAAGTATAATCTCAGGAGACAATCCAGGTTTCATACCAAGCATTTTGGATATCAAACTGCTTGATGAAGTTGTCAAGGTTACCAATGTTGAAGCTATTGAAATGGCAAGGAGATTAGCATTGGAAGAAGGATTACTGGTTGGGATTTCTTCAGGAGCTGCAGCAGCAGCTGCGATAACTTTAGCAAGACGGCCTGAAAATTCTGGAAAACTTATAGCGGTTATTTTTCCTAGTTTTGGTGAGAGGTATCTTACTACTGCCCTCTTCAATTCTATTTATGAAGACGTTCAGAGAATGTAA 1119 0.4272 MALSSSSSASCSCFSPSTTILPPSLPFTTQFHRNVRFRRAIAATATVSTTSSTPPLFSTTREGLDAVNIAEDVTQLIGNTPMIYLNKVTDGCVANVAAKLESMEPCRSVKDRIGYSMLADAEESGAISPGKTVLVEPTTGNTGLGLAFVAATKGYKLIVTMPASVNIERRILLRTFGAEVVLTNAEKGLKGAVDKAEEIVYATPNAYMFRQFDNRNNTKIHFETTGPEIWGDTMGNVDLLVAAIGTGGTITGTGQYLKLMNKKIKVVGVEPADRSIISGDNPGFIPSILDIKLLDEVVKVTNVEAIEMARRLALEEGLLVGISSGAAAAAAITLARRPENSGKLIAVIFPSFGERYLTTALFNSIYEDVQRM 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02618 372 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 99 117 IPR001216 GO:0006535
Mepo3g02618 372 FunFam Cysteine synthase 183 358 - -
Mepo3g02618 372 PANTHER CYSTATHIONINE BETA-SYNTHASE 69 368 - -
Mepo3g02618 372 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 69 364 IPR036052 -
Mepo3g02618 372 CDD CBS_like 78 358 - -
Mepo3g02618 372 FunFam Cysteine synthase 104 182 - -
Mepo3g02618 372 NCBIfam cysteine synthase 74 362 IPR005856 GO:0004124|GO:0006535
Mepo3g02618 372 Gene3D - 75 357 IPR036052 -
Mepo3g02618 372 NCBIfam cysteine synthase A 74 362 IPR005859 GO:0004124|GO:0006535
Mepo3g02618 372 Gene3D - 111 213 IPR036052 -
Mepo3g02618 372 Pfam Pyridoxal-phosphate dependent enzyme 73 349 IPR001926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02618 Mepo-Chr3 36134903 36139465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02618 65 372 Miscellaneous Gene Families AT3G03630 79.221 3.65e-170 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02618 K22846 - gmx:100819100 553.132