Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02581 ATGAGCATTCTGTCATCACGAACAAGTTCCCGTTCCGTAACAGAAACCGTTAACGGTTCACACAAGTTCGTAATCAAAGGCTACTCACTTGCAAAAGGAATGGGAGTTGGTAAACACATAGCCAGCGAAACTTTCACCGTCGGTGGTTATCAATGGGCAATTTACTTCTACCCCGACGGTAAAAACCCAGAAGATAATTCTGCTTATGTTTCTGTTTTCATTGCTCTCGCTTCTGAAGGTACCGATGTTAGAGCTCTTTTTGAACTCACTTTGCTTGATCAGAGTCCTAATGGCAAACATAAGGTTCATAGTCATTTTGATCGCTCTCTTGAAAGTGGTCCTTATACTCTTAAGTATCGCGGCAGCATGTGGGGGTATAAGCGGTTTTTCAAACGTGCTCAACTCGAGGCATCGTCCTTCCTTAAGGATGACTGCTTGAAGATAAACTGCACTGTTGGTGTGGTTGTGTCGTCCATTGATTGTTCTAAATTGACCACCATACATGTTCCTGAATCTGACATTGGATCGCATTTTGGCATGCTGTTAGAGAATGAGGAAGGATCTGATGTTACTTTCTCTGTTGGTGGAGAAAGATTTCACGCACATAAACTTGTTATGGCAGCTCGGTCAACTGCATTTGAAACTGAGTTTTTCAATAGTATGGAGGAAGATGACCGTGATGTAGTTGTTACGGACATGGAACCTAAGGTTTTCAAGGCTTTGCTTCATTTTATTTATCGAGACACTCTTATAGAAGATGAAGAGTTCTTCATGTCAAGTTCATCGTTCCTGCCTTCAATATCTGAAACATTTGCAGCAAAATTATTAGCTGCTGCGGAAAAGTATGATTTGCCTAGACTTAAGCTGATGTGTGAGTCTGTACTTTGCAAAGATATATCTATAGACTCTGTTGCCTATATTCTGGCTCTTGCTGATAGCTATCATGCCACGGAGTTAAAGGCCATCTGTCTACAATTTTCTGCTGAAAACCTTGTTGCTGTGATGCAGTCTGATGGTTTTGAGTATCTAAAAGAAAACTGTCCGTTGCTGCAATCAGAACTGCTTAAGACAGTTGCAGGAGGCGAAGAGGAATTTAGCGGTGAAGGAAAATGCCGAAGTGTGTGGGCCCAAGTTTCTGATGGCGGTGAGACTAATGATAGGAGCGTAAGACAACAAACCTGGGAAAACGGAGTGGAAAGAGGTCAGAACTTATGGGTTAACCTTTCTGACGGTGTTAACAATGATCGGAGTCCAGGGCAAGAAGCTTGA 1269 0.424 MSILSSRTSSRSVTETVNGSHKFVIKGYSLAKGMGVGKHIASETFTVGGYQWAIYFYPDGKNPEDNSAYVSVFIALASEGTDVRALFELTLLDQSPNGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFKRAQLEASSFLKDDCLKINCTVGVVVSSIDCSKLTTIHVPESDIGSHFGMLLENEEGSDVTFSVGGERFHAHKLVMAARSTAFETEFFNSMEEDDRDVVVTDMEPKVFKALLHFIYRDTLIEDEEFFMSSSSFLPSISETFAAKLLAAAEKYDLPRLKLMCESVLCKDISIDSVAYILALADSYHATELKAICLQFSAENLVAVMQSDGFEYLKENCPLLQSELLKTVAGGEEEFSGEGKCRSVWAQVSDGGETNDRSVRQQTWENGVERGQNLWVNLSDGVNNDRSPGQEA 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02581 422 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 7 355 IPR045005 GO:0016567
Mepo3g02581 422 SMART math_3 23 135 IPR002083 GO:0005515
Mepo3g02581 422 FunFam BTB-POZ and math domain 1 164 293 - -
Mepo3g02581 422 Gene3D Potassium Channel Kv1.1; Chain A 164 293 IPR011333 -
Mepo3g02581 422 SUPERFAMILY TRAF domain-like 15 154 - -
Mepo3g02581 422 CDD BTB_POZ_BPM_plant 174 296 - -
Mepo3g02581 422 FunFam BTB/POZ and MATH domain-containing protein 4 17 156 - -
Mepo3g02581 422 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 17 156 IPR008974 GO:0005515
Mepo3g02581 422 CDD BACK_AtBPM-like 296 357 IPR034090 -
Mepo3g02581 422 Pfam BTB/POZ domain 180 297 IPR000210 GO:0005515
Mepo3g02581 422 CDD MATH 19 152 IPR002083 GO:0005515
Mepo3g02581 422 SMART BTB_4 188 299 IPR000210 GO:0005515
Mepo3g02581 422 SUPERFAMILY POZ domain 165 299 IPR011333 -
Mepo3g02581 422 Gene3D - 298 372 - -
Mepo3g02581 422 ProSiteProfiles BTB domain profile. 188 254 IPR000210 GO:0005515
Mepo3g02581 422 ProSiteProfiles MATH/TRAF domain profile. 18 152 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02581 Mepo-Chr3 35807484 35815195 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02581 K10523 - gmx:100809683 773.081