Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02574 ATGGAAGACTTCAACCACCACCTCTCCGCCCTCTCCACCTCCCTCCAATCCATCCCCACCTCCGACTCCTTCCGCTTCCACTACAACCTCCCCGAATTCCGTCACCTCATCGACCAACTTACCCAAAAATCCCAATCCATGCTCAACCAAATCGGCTCTTCCGACCACATTTGGGGCCCTAACTCCTCCTTCCCTGCCGACATCGACGACGCTTACGAATGGATCGTTAATGCTAACGACGATGTTTTGGAACTCGTCAACGAAGTAGTCGACGAGTTTCATAGGGTTCTTATGGAGCAAGATATGGAAAAAGGGGAAGATGGGTTTTTTAAGATTAAGAAAGAGAGGAAAGGGTTGATTCTTTGGGGTGATGATCATGGGAATGAAACTAAGAAGAAAGTTTCGTTTCATGTTCATACTCTTAGGAAGCCTCAGTATCATTATAATCTTGCTGTTGATAATTCCAATCAGCCTTTTCAACATGTTTGGTTGGAGAAGGAGAAGACTGAAGATGGTGAAAGGTTTATCCATCCTTTGGAGTATTACTCTGTTTTAGATTTTGTTGATAAAAATAGTATTGAGAGTCTTGTACCAGTAAAACCTCCCCCGCTAGAATGCACACCTTTCAAGCTTGTGGAGGAAGTCAAAGGGTTGAAGGAGTTGGCTGCTAAGCTGAGCTTGGTTGAAGAATTTGCGGTGGATTTGGAACATAATCAATATCGGTCTTTTCAAGGTTTGACTTGCTTGATGCAAATATCAACTCGGACCGAAGATTTTATTGTCGATACTCTGAAACTCCGTGATCATGTTGGGAAACACCTGCGGGAAGTTTTCATGGACCCTACCAAGAAAAAGGTCTTGCATGGAGCAGATCGAGACATTGTGTGGTTGCAACGGGACTTTGGCATTTATATCTGTAATATGTTTGACACTGGCCAGGCTTCGAGAGTGTTAAAAATGGAGAGATATAGTTTGCAACATCTTTTGCAACACTTTTGTGGGGTTACTGCAAACAAAGAGTACCAGAATGCAGACTGGAGAGCACGCCCTCTTCCTGATGTAATGATAAAGTATGGAAGAGAAGATACACACTATCTGCTTTATATATATGATTTGATGAGGATCAAGCTATTTGAACTGTCTAAGGAGTCTGAAAGTCCAGATGATCCTCTGTTGGAGGTTTACCAGCGGAGTTATAATGTCTGCATGCAGCTGTATGAGAAAGATCTTTTGACAGAAAACTCCTTCCTTAATATAAAGGGGTTGCGAGGGGCTGGTTTTAACGGTCAGCAGCTTGCCGTTGTTTCAGGGCTTTATGAATGGCGTGATGTTCTTGCGCGGGCAGAGGATGAGAGTACTGGGTATATATTGCCAAATAAAGTTATTCTTTTAATTGCTAAGCATATGCCCGTCACTGCAAGCAATCTACGGCGATTAATAGCGGAGAGGTCAAGACTACCATATGTTGAGCGCAATCATGATATCGTTGTTAACATTGTCAGACATTCTATGGGAAAGGCTGCTGCATTTGAAGAAGCTGCACTTCGTTTGAAAGAAGAACACGCTGCCTTTGTAGAAGCTGCTGCACTTCGTTTGAAAGAAGAAGAACATGCTGCGAGTGTGTCAAATGTAGCATCTGTTGAGGATGGAACTGAAGCTCCCCAATCTCCTTCCTTGAACTTAAAGGATGAATGTGCAGCAAATGGAAGCATTGGAATTGAAAATGCCACCTGTGTTAATATCTCTGAGAAGTCCTTGTTTTCTTCTGACCCTAATTCCTCTACAGTGAAGGAAAATGGAACAAATGTTCAGGCGCTAAAAATGCCTACTGTTGCTTGCGATGCAACGCTGCTGGGAAATTCAACTTCAGAAGGGAATGGTTATCCTGACAAAAAGGGAAAGAAAAAGATCAAGGTAGAACAGAATGTATCATCGATCAATCTTCCAAGCCATTCATTTTTGGGCAATAATGAGAAGTCAAAACTGGCTGTAAGTGTAGCTTCAGTTTCCACATCTACCCCGGATGCAAACATAACAGTACACTTGGATTCAGACTCGGAGGATATGATGCAGTGTAACCTATGA 2085 0.4288 MEDFNHHLSALSTSLQSIPTSDSFRFHYNLPEFRHLIDQLTQKSQSMLNQIGSSDHIWGPNSSFPADIDDAYEWIVNANDDVLELVNEVVDEFHRVLMEQDMEKGEDGFFKIKKERKGLILWGDDHGNETKKKVSFHVHTLRKPQYHYNLAVDNSNQPFQHVWLEKEKTEDGERFIHPLEYYSVLDFVDKNSIESLVPVKPPPLECTPFKLVEEVKGLKELAAKLSLVEEFAVDLEHNQYRSFQGLTCLMQISTRTEDFIVDTLKLRDHVGKHLREVFMDPTKKKVLHGADRDIVWLQRDFGIYICNMFDTGQASRVLKMERYSLQHLLQHFCGVTANKEYQNADWRARPLPDVMIKYGREDTHYLLYIYDLMRIKLFELSKESESPDDPLLEVYQRSYNVCMQLYEKDLLTENSFLNIKGLRGAGFNGQQLAVVSGLYEWRDVLARAEDESTGYILPNKVILLIAKHMPVTASNLRRLIAERSRLPYVERNHDIVVNIVRHSMGKAAAFEEAALRLKEEHAAFVEAAALRLKEEEHAASVSNVASVEDGTEAPQSPSLNLKDECAANGSIGIENATCVNISEKSLFSSDPNSSTVKENGTNVQALKMPTVACDATLLGNSTSEGNGYPDKKGKKKIKVEQNVSSINLPSHSFLGNNEKSKLAVSVASVSTSTPDANITVHLDSDSEDMMQCNL 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02574 694 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 5 650 IPR045092 GO:0000175|GO:0000467
Mepo3g02574 694 SUPERFAMILY Ribonuclease H-like 142 409 IPR012337 -
Mepo3g02574 694 Gene3D - 132 416 IPR036397 GO:0003676
Mepo3g02574 694 Pfam PMC2NT (NUC016) domain 16 94 IPR012588 GO:0000176|GO:0006396
Mepo3g02574 694 ProSiteProfiles HRDC domain profile. 428 510 IPR002121 GO:0003676
Mepo3g02574 694 MobiDBLite consensus disorder prediction 544 561 - -
Mepo3g02574 694 SUPERFAMILY HRDC-like 413 504 IPR010997 GO:0000166|GO:0044237
Mepo3g02574 694 Gene3D HRDC domain 417 511 IPR044876 -
Mepo3g02574 694 MobiDBLite consensus disorder prediction 541 561 - -
Mepo3g02574 694 FunFam Protein RRP6-like 2 isoform A 140 413 - -
Mepo3g02574 694 Pfam 3'-5' exonuclease 212 374 IPR002562 GO:0003676|GO:0006139|GO:0008408
Mepo3g02574 694 CDD Rrp6p_like_exo 205 397 - -
Mepo3g02574 694 FunFam Putative exosome component 10 415 512 - -
Mepo3g02574 694 SMART hrdc7 428 509 IPR002121 GO:0003676
Mepo3g02574 694 Pfam HRDC domain 431 479 IPR002121 GO:0003676
Mepo3g02574 694 SMART 35exoneu6 209 378 IPR002562 GO:0003676|GO:0006139|GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02574 Mepo-Chr3 35728805 35739076 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02574 K12591 - gmx:100804872 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02574 3 35728805 35739076 Mepo3g02574 3 35728805 35739076 ECH