Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02557 ATGGAAGTAGCTAGTTGTCCACATGCACAGAAGCAGAATTTGCAGAAAACAGGTCGCAAAGTTTGTTCTGGATCTCCAAAAGATCTGTGGCTTGTTGTGCGTGAAGGATCTCTGAATGACGTAGAGACGGCATTGTCATCACTAAAAAAGAGCGGGGGCAATATCAATGTGAGGAACACCTACGGGTTGACTCCTCTTCATGTTGCAGCTTGGAGAAACCACATTCCCATTGTAAGGAGGCTTCTTGCAGCTGGTGCAGATCCTGATGCCCGAGATGGAGAATCAGGATGGAGTAGCCTTCACAGGGCTCTGCATTTTGGTCATCTTGCTATTGCAAGCATCCTTCTTCAGCACGGTGCCTCAATTACATTGGAGGATTCTAAATCTCGTATACCTGTAGACCTCATATCTGGCAATGTGTTTCAGGTTTTTGGAAATGAACACAGTTCAGTTGCCACTGAGCTATTTAGTTGGGGCAGTGGTGCAAATTATCAGCTTGGTACTGGAAATGCGCATATCCAGAAGCTGCCATGCAAAGTTGATTCACTTAATGGTTCAATCATTAAGCTGATTTCTGCGGCAAAGTTCCATAGTGTGGCCCTTACTGATCGTGGAGAAGTGTATACTTGGGGATTCGGAAGGGGTGGCCGTCTAGGGCATCCTGATTTTGACATACACAGTGGTCAAGCTGCCATCATCACTCCCCGCCAGGTGATTTCTGGTCTAGGTTCTCGCAGAGTGATGGCAATTGCTGCAGCTAAGCATCATACCGTTGTTGCTACTCAGGGTGGGGAAGTGTTCACTTGGGGATCCAATAGAGAGGGACAGCTTGGGTACACTTCTGTGGATACACAACCCACACCTCGTAGAGTATCTTCTTTGAGGTCAAGAATTGTTGCCGTTGCTGCAGCAAACAAGCACACAGCTGTAGTTTCTGATTCAGGTGAAGTTTTTACTTGGGGGTGCAATAGAGAGGGTCAGCTTGGTTATGGCACTTCAAACTCGGCATCTAACTACACCCCACATGTGGTTGAATCCTTGAAGGGAAAGATTTTAACTAGAGTTTCTGCAGCAAAATATCACACAATTGTATTAGGATCTGACGGAGAGGTATTTACCTGGGGTCATCGACTTGTTACTCCAAAACGTGTAGTGATTACTAGGAACTTAAAGAAAAGTGGAAGCATTCCTTTAAAATTTCATCGCAAGAAACGACTTCACGTAGTTTCTATAGCTGCTGGAATGGCACATAGCATGGCTCTTACAGAAGATGGTGCACTATTTTATTGGATCTCCTCTGATCCTGATCTTAGATGCCAACAGTTATATGCTATGTGTGGAAGAAATATGGTGAACATATCTGCTGGAAAGTACTGGACTGCTGCAGTTACAGCTACAGGTGATGTTTACATGTGGGACGGGAAGAAAGGTAAGGATAAGCCGCTTGTTGCAACTCGGATGCATGGTGTAAAGAAGGCTACTTCAGTTTCAGTTGGTGAAACACATTTGTTAATTGTGGCTTCCCTTTATCATCCTGTCTACCCTATCAACACGATTGATAATTCTCAGAAGCTCAAGTCGAATAACGGAAGTAGTATGGACGAGTTAAGTGAAGACATCTTATTTGAGGATATTGATTCCCATAATTCCTTGGATACAGTTCAAAATGATAATCTTAGTCAAAGGTCTACACCCAGCTTAAAAAGTCTCTGTGAAAAAGTAGCAGCAGAGTCTCTACTGGAGCCACGGAATGCCATACAATTGCTTGAGATTGCTGATTCTCTTGGAGCTGATGATTTGAAGAAATATTGCGAGGACATTGTCATGCGCAACCTTGATTATATATTTTCAGTTTCAACCCATGCTGTATCAAGTGCTTCACTAGATATTTTGGCGAACCTTGAGATGTTGTTAGACCAGAGATCATCCGAGCCGTGGAGTTACCGTCGGCTCCCAACTCCAACTGCTACGCTCCCTGTCATCATTGACAGTGAAGATGATGATTACGAGATAGAGCATCAAAGGACTTGTGACAAACCAATGAAACTGTCTGCACTCAAATTGGAGAAAGTTCAAAGGTCAGATTCCTTTCTACAGCCCAAGGATGATCCTGATAGTGAAACGTCGAAAGTAGTTCGAGCTATAAGGAAGAAGTTGCAGCAGATTGAGATGCTTGAAACTAAACAGTCTAAAGGACATCTTCTCGATGACCAGCAGGTTGCAAAACTTCAATCCAAGTCAGCGCTTGAGAGCTCACTTGCAGAGCTAGGTGTTCCCGTAGAGACCCCAAGGAATAAAGAGTCATCTTCTATTCTACCAGAAGTTAAAGGTAGTAAGAAAGGTAAATCATCGAAAAAACAAAGGAGAAAGAGCACCAACAAATCAAACACAGAGCAGACGGAAATAGAGTCCGTTTATTCTAAAAGTGAATTGATCCCCGAATCTGAAGACCTATTGGACATTGACGTCAAGACTGCTCCTAATTCAAAGGTGGAAGAGGATGTCTGCAAACATTCCACGGAAGACCAGGGTGAAAAAGATTTAGGTTTTGCTGTACAGAAGAAAGATACTTCAGAGTTGGTGAAGGGTACGGCTCAGTCACCAAAGGTTTCCAAGAAGAAGAGCAAGAAGGGTGGGCTTTCTATGTTTCTGAGTGGTGCTCTTGATGAAGTCCCAAAAGAGGTGGCTCCCCCTCCACCGACACCAAAAAATGATGGTCCTGCTTGGGGTGGGGCCAAGTTTTTGAAGGGTCCTTCTTCTCTTCGTGAAATCCAGGATCAACAGAGCAAAATAGTAAAAGGTAACAAGCTAGCTGAGGTTAAAGTCAAGGTGGAAGATCTTTCTGACTTTGGCAGTGGTGGGAAAATAAAGTTGAGTTCATTTCTTCTTTCTAGCCCAATACCTGTTGCGCCAACTCGAAGTTCTCAGGCATCTGATGGAGATAAAAATACCCCTCCTTGGGCTGCTTCAGTAACCCCTCCTCAATCCTCTAAGCTGTCTTTAAGGGACATCCAAATGCAACAGGTAAAGAAACAAGGCCTTTCCAGTAGTCCAAAGACCAAAACTTCGGGATTCACTATAGCTACTGGTCAAGGCTCACCATCTGAAACAACCGGGGTGAACCGCTGGTTCAAACCCGAAGTGGAATCACCTTCCTCCATTAGGTCTATTCAAATCGAGGAAAAAGCTATGAAAGATCTCAAACGCTTCTATAGCAGTGTAAAGATTGTCAAAAGGCAACAATGTTAA 3249 0.4392 MEVASCPHAQKQNLQKTGRKVCSGSPKDLWLVVREGSLNDVETALSSLKKSGGNINVRNTYGLTPLHVAAWRNHIPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAIASILLQHGASITLEDSKSRIPVDLISGNVFQVFGNEHSSVATELFSWGSGANYQLGTGNAHIQKLPCKVDSLNGSIIKLISAAKFHSVALTDRGEVYTWGFGRGGRLGHPDFDIHSGQAAIITPRQVISGLGSRRVMAIAAAKHHTVVATQGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSLRSRIVAVAAANKHTAVVSDSGEVFTWGCNREGQLGYGTSNSASNYTPHVVESLKGKILTRVSAAKYHTIVLGSDGEVFTWGHRLVTPKRVVITRNLKKSGSIPLKFHRKKRLHVVSIAAGMAHSMALTEDGALFYWISSDPDLRCQQLYAMCGRNMVNISAGKYWTAAVTATGDVYMWDGKKGKDKPLVATRMHGVKKATSVSVGETHLLIVASLYHPVYPINTIDNSQKLKSNNGSSMDELSEDILFEDIDSHNSLDTVQNDNLSQRSTPSLKSLCEKVAAESLLEPRNAIQLLEIADSLGADDLKKYCEDIVMRNLDYIFSVSTHAVSSASLDILANLEMLLDQRSSEPWSYRRLPTPTATLPVIIDSEDDDYEIEHQRTCDKPMKLSALKLEKVQRSDSFLQPKDDPDSETSKVVRAIRKKLQQIEMLETKQSKGHLLDDQQVAKLQSKSALESSLAELGVPVETPRNKESSSILPEVKGSKKGKSSKKQRRKSTNKSNTEQTEIESVYSKSELIPESEDLLDIDVKTAPNSKVEEDVCKHSTEDQGEKDLGFAVQKKDTSELVKGTAQSPKVSKKKSKKGGLSMFLSGALDEVPKEVAPPPPTPKNDGPAWGGAKFLKGPSSLREIQDQQSKIVKGNKLAEVKVKVEDLSDFGSGGKIKLSSFLLSSPIPVAPTRSSQASDGDKNTPPWAASVTPPQSSKLSLRDIQMQQVKKQGLSSSPKTKTSGFTIATGQGSPSETTGVNRWFKPEVESPSSIRSIQIEEKAMKDLKRFYSSVKIVKRQQC 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02557 1082 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 369 424 IPR000408 -
Mepo3g02557 1082 SMART ANK_2a 61 90 IPR002110 GO:0005515
Mepo3g02557 1082 SMART ANK_2a 95 124 IPR002110 GO:0005515
Mepo3g02557 1082 ProSiteProfiles Ankyrin repeat region circular profile. 61 92 - -
Mepo3g02557 1082 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 264 314 IPR000408 -
Mepo3g02557 1082 MobiDBLite consensus disorder prediction 966 1040 - -
Mepo3g02557 1082 SUPERFAMILY RCC1/BLIP-II 118 430 IPR009091 -
Mepo3g02557 1082 PANTHER BTK-BINDING PROTEIN-RELATED 24 1072 - -
Mepo3g02557 1082 PRINTS Chromosome condensation regulator RCC1 signature 264 280 IPR000408 -
Mepo3g02557 1082 PRINTS Chromosome condensation regulator RCC1 signature 207 223 IPR000408 -
Mepo3g02557 1082 PRINTS Chromosome condensation regulator RCC1 signature 301 317 IPR000408 -
Mepo3g02557 1082 PRINTS Chromosome condensation regulator RCC1 signature 414 432 IPR000408 -
Mepo3g02557 1082 PRINTS Chromosome condensation regulator RCC1 signature 154 170 IPR000408 -
Mepo3g02557 1082 PRINTS Chromosome condensation regulator RCC1 signature 188 201 IPR000408 -
Mepo3g02557 1082 PRINTS Chromosome condensation regulator RCC1 signature 317 331 IPR000408 -
Mepo3g02557 1082 Pfam Regulator of chromosome condensation (RCC1) repeat 264 311 IPR000408 -
Mepo3g02557 1082 Pfam Regulator of chromosome condensation (RCC1) repeat 155 201 IPR000408 -
Mepo3g02557 1082 Pfam Regulator of chromosome condensation (RCC1) repeat 205 259 IPR000408 -
Mepo3g02557 1082 Pfam Regulator of chromosome condensation (RCC1) repeat 314 365 IPR000408 -
Mepo3g02557 1082 SUPERFAMILY Ankyrin repeat 32 136 IPR036770 -
Mepo3g02557 1082 CDD BACK 582 617 - -
Mepo3g02557 1082 ProSiteProfiles Ankyrin repeat region circular profile. 95 126 - -
Mepo3g02557 1082 MobiDBLite consensus disorder prediction 966 1041 - -
Mepo3g02557 1082 MobiDBLite consensus disorder prediction 757 916 - -
Mepo3g02557 1082 SUPERFAMILY RCC1/BLIP-II 407 504 IPR009091 -
Mepo3g02557 1082 ProSiteProfiles Ankyrin repeat profile. 95 127 IPR002110 GO:0005515
Mepo3g02557 1082 Gene3D - 385 509 IPR009091 -
Mepo3g02557 1082 Gene3D - 121 384 IPR009091 -
Mepo3g02557 1082 MobiDBLite consensus disorder prediction 1 22 - -
Mepo3g02557 1082 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 153 204 IPR000408 -
Mepo3g02557 1082 MobiDBLite consensus disorder prediction 813 853 - -
Mepo3g02557 1082 PRINTS Ankyrin repeat signature 62 77 IPR002110 GO:0005515
Mepo3g02557 1082 PRINTS Ankyrin repeat signature 111 125 IPR002110 GO:0005515
Mepo3g02557 1082 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 205 263 IPR000408 -
Mepo3g02557 1082 ProSiteProfiles Ankyrin repeat profile. 61 93 IPR002110 GO:0005515
Mepo3g02557 1082 Gene3D - 25 120 IPR036770 -
Mepo3g02557 1082 Pfam Ankyrin repeats (3 copies) 48 126 IPR002110 GO:0005515
Mepo3g02557 1082 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 315 368 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02557 Mepo-Chr3 35575380 35584356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02557 32 135 Acyl Lipid Metabolism Gene Families AT5G53470 35.577 7.06e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02557 K24810 - gmx:100800604 1716.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02557 3 35575380 35584356 Mepo3g02557 3 35575380 35584356 ECH