Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02555 ATGATGAAGTATAAGAACCCTAATGAGTCAATTGATATTAGGGTTGATGATCTTATTAGTAGAATGACTCTTGAGGAGAAAATTGGTCAAATGTTACAGATTGAGCGCAAATATGCATCTGATAATGTGCTCAACAAGTATTTTATAGGGAGTGTTATGAGTGAGGGAGGAAGTACTCCAGTTCCACAGGCTTCTGCTGAAAACTGGATTGATATGTTGAATGAATTTCAGAAGGATGCTTTATCAACAAGGCTTGGAATTCCAATTTTTTATGGGATTGATGCTGTTCATGGCAACAGCCCTGTTTATAAAGCAACTATTTTTCCTCACAATATTGGGCTGGGAGCTACCAGGGACCCTGAACTAGTGAAGAGAATTGGAGCAGCAACTGCACTTGAAGTTAGAGCAACAGGAATGCAATATGTTTATGCACCTTGCATAGCAGTTTGTAGAGATCCAAGATGGGGTCGGTGTTACGAAAGCTACAGTGAAGATCCTAAAGTAGTTCAAGCTATGACTGAAATCATATTAGGAATGCAAGGGGACATTCCTGATAATATGCCAATGGGTGTTCCTTTTATCGCTGGAAATGAAAAGGTTATAGCTTGTGCTAAGCACTACGTCGGTGACGGTGGAACAACCAATGGGATAGATGAGAGTGACACTGTTATAGATAGAGATGGATTGATGAAAATTCACATGCCAGGCTACTTGAACTCCATTAGCAAGGGTGTGGCAACCATTATGGTATCTTACTCGAGTTGGAATGGAGTTAAAATGCATGCTCATCATGACCTTATTACTAGCTTCCTCAAAAACACACTCAATTTCCAGGGATTTGTTATTTCAGATTTTGAGGGTATTGATAGGATTACCTCTCCATTTCGTGCTAACTGCACTTATTCAGTTCAAGCAGGAGTGTCTGCTGGAATTGACATGTTCATGGTTCCAAAGTTCTACACCGAATTCATTGATGATCTAACAACATTGGTGAATAATAAATTCATTCCTATGAGTCGAATTAATGATGCGGTGAGAAGAATTTTGCGGGTTAAATTCATGATGGGTATTTTTGAGAACCCATTTGCTGATTACAGTTTGGTCAAATATCTTGGGATTAAGGAGCACAGAGAACTGGCTAGGGAAGCTGTAAGGAAATCCATGGTCCTTCTAAAAAATGGTAAATCTGCCGAGAAGCCTTTGTTACCTCTTCCTAAAAAGGTTCCAAAAATACTTGTGGCCGGAAGCCATGCAAATAATCTAGGATATCAGTGTGGTGGCTGGACAATTGAATGGCAAGGAGTCAATGGCAACGATGATATCAAAGGGACTACAATTCTCAATGCTGTGAAAAACGCTGTTGATCCAGAGACCGCAGTGATCTACAAGGAGAATCCTGATAAAGAATTTCTTGAATCCAATGAATTTTCCTATGCTATAGTTGTAGTAGGAGAGCATCCTTATGCTGAAATGCATGGTGACAATATGAACTTGACAATCCCAATCCCTGGTCCTGACACCATAACAAATGTTTGTGGAGCTATGAAGTGTGTGGTTATAATTATTTCGGGCCGGCCTTTAGTTATCGAACCGTATGTTGGTTTGATGGATGCAGTTGTTGCTGGTTGGCTACCAGGTAGTGAAGGACAAGGTGTGGCTGATGTTTTATTTGGTGACTATGGTTTCACAGGAAAGCTTCCAAGAACATGGTTCAAAAGTGTTGATCAACTTCCAATGAATGTTGGAGATCCCCATTATGACCCCCTTTTCCCATTTGGGTTTGGCCTTACTACCAAACCTACTAAGGTTATTTACTCTGAATAG 1824 0.4024 MMKYKNPNESIDIRVDDLISRMTLEEKIGQMLQIERKYASDNVLNKYFIGSVMSEGGSTPVPQASAENWIDMLNEFQKDALSTRLGIPIFYGIDAVHGNSPVYKATIFPHNIGLGATRDPELVKRIGAATALEVRATGMQYVYAPCIAVCRDPRWGRCYESYSEDPKVVQAMTEIILGMQGDIPDNMPMGVPFIAGNEKVIACAKHYVGDGGTTNGIDESDTVIDRDGLMKIHMPGYLNSISKGVATIMVSYSSWNGVKMHAHHDLITSFLKNTLNFQGFVISDFEGIDRITSPFRANCTYSVQAGVSAGIDMFMVPKFYTEFIDDLTTLVNNKFIPMSRINDAVRRILRVKFMMGIFENPFADYSLVKYLGIKEHRELAREAVRKSMVLLKNGKSAEKPLLPLPKKVPKILVAGSHANNLGYQCGGWTIEWQGVNGNDDIKGTTILNAVKNAVDPETAVIYKENPDKEFLESNEFSYAIVVVGEHPYAEMHGDNMNLTIPIPGPDTITNVCGAMKCVVIIISGRPLVIEPYVGLMDAVVAGWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDPHYDPLFPFGFGLTTKPTKVIYSE 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02555 607 Gene3D - 1 372 IPR036962 GO:0004553|GO:0005975
Mepo3g02555 607 PRINTS Glycosyl hydrolase family 3 signature 84 100 IPR001764 GO:0004553|GO:0005975
Mepo3g02555 607 PRINTS Glycosyl hydrolase family 3 signature 270 288 IPR001764 GO:0004553|GO:0005975
Mepo3g02555 607 PRINTS Glycosyl hydrolase family 3 signature 200 216 IPR001764 GO:0004553|GO:0005975
Mepo3g02555 607 PRINTS Glycosyl hydrolase family 3 signature 154 170 IPR001764 GO:0004553|GO:0005975
Mepo3g02555 607 PRINTS Glycosyl hydrolase family 3 signature 108 127 IPR001764 GO:0004553|GO:0005975
Mepo3g02555 607 Gene3D - 373 599 IPR036881 GO:0004553|GO:0005975
Mepo3g02555 607 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 2 603 - -
Mepo3g02555 607 Pfam Glycosyl hydrolase family 3 C-terminal domain 388 597 IPR002772 GO:0004553|GO:0005975
Mepo3g02555 607 FunFam Glycosyl hydrolase family protein 373 599 - -
Mepo3g02555 607 Pfam Glycosyl hydrolase family 3 N terminal domain 23 351 IPR001764 GO:0004553|GO:0005975
Mepo3g02555 607 SUPERFAMILY (Trans)glycosidases 2 387 IPR017853 -
Mepo3g02555 607 FunFam Beta-D-glucan exohydrolase isoenzyme ExoI 1 372 - -
Mepo3g02555 607 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 388 597 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02555 Mepo-Chr3 35557524 35562222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02555 2 603 Glycoside Hydrolase AT5G20950 69.601 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02555 K05349 - gmx:100816705 1053.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02555 3 35557524 35562222 Mepo3g02555 3 35557524 35562222 ECH