Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g02534 ATGACAATGCAATCGCATCTTCTAGTGGGACCCATCTCCATCACCACTCATTCTACCGCCGCTGATTCTTCCTACCTCTCTGCCGCGCCTCGCCGCCGGAGATATCCTCTCATCTCAGCAGCTTCCTCTTCTTCAGCTTCAGCTATCAACGGCGGCGGCGACCACTATACCGTACTCGGTGTCGCGCGTTCTGCGGATGCTGTTGAGATCAAACGCGCTTATCGTCTCCTCGCTCGTAAGTATCATCCTGATGTTTGCAAGGATTTAAATGCTGCTGAATCGTTCAAGAGTATCCGCCATGCTTATGAAGTACTATCCAATGAAACAACAAGAGTTCAGTATGACCGGGAACTTCAATTCAGTCACAAGCCATACCAAGAAAAATGGAGTTACAACACCGAATTTGAAGATGAGGTAAGAAGATATAGGTGGGCTTACATGAGGAAGAAAATGCGTCGTGAAAGATACTGGGAACATTACAATGCCAACGAGGATTGCTACAACAGCAAAACAGATGATAAGGAGGATGAAGGAAATTTAGTTGAAAAAATGGGTTCATTTGTTGAAGTTCTTAGATCAACATTCTTGTCACTATTATTATTCCAAACATTAGGATCCCGGTTCTCCCTTACATTTAGCGGTCTGACAGCATTGTTTGATAGGAAATTAGATGCTGGCTATAAAGTTGGTTATGTAATAGCATGGATTTTGGGTGGGAGGGGTGGCATAATGCTAGCGTTGATCTTGTCATTTGCAAGTTGGGTTTGTGGGAAAACCAGTAGTAGTGTGGTTGCACTATTTATGGTAGCCATGTGGGTTGGCTCATCCCTTTCAAGTTATGCACCAATTCCCCAAGGTGCTCTGTTAACTCTAATCTACATGTCCATTAAGCTGCAATCTGACCAAATATAA 912 0.4397 MTMQSHLLVGPISITTHSTAADSSYLSAAPRRRRYPLISAASSSSASAINGGGDHYTVLGVARSADAVEIKRAYRLLARKYHPDVCKDLNAAESFKSIRHAYEVLSNETTRVQYDRELQFSHKPYQEKWSYNTEFEDEVRRYRWAYMRKKMRRERYWEHYNANEDCYNSKTDDKEDEGNLVEKMGSFVEVLRSTFLSLLLFQTLGSRFSLTFSGLTALFDRKLDAGYKVGYVIAWILGGRGGIMLALILSFASWVCGKTSSSVVALFMVAMWVGSSLSSYAPIPQGALLTLIYMSIKLQSDQI 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g02534 303 Pfam DnaJ domain 54 115 IPR001623 -
Mepo3g02534 303 ProSitePatterns Nt-dnaJ domain signature. 95 114 IPR018253 -
Mepo3g02534 303 ProSiteProfiles dnaJ domain profile. 54 118 IPR001623 -
Mepo3g02534 303 PRINTS DnaJ domain signature 56 74 IPR001623 -
Mepo3g02534 303 PRINTS DnaJ domain signature 90 110 IPR001623 -
Mepo3g02534 303 PRINTS DnaJ domain signature 74 89 IPR001623 -
Mepo3g02534 303 SMART dnaj_3 53 110 IPR001623 -
Mepo3g02534 303 SUPERFAMILY Chaperone J-domain 54 124 IPR036869 -
Mepo3g02534 303 CDD DnaJ 54 107 IPR001623 -
Mepo3g02534 303 Gene3D DnaJ domain 53 195 IPR036869 -
Mepo3g02534 303 FunFam Uncharacterized protein 51 198 - -
Mepo3g02534 303 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 32 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g02534 Mepo-Chr3 35401022 35405416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g02534 54 119 Miscellaneous Gene Families AT5G49580 43.662 2.33e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g02534 - - gmx:100791619 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05653 3 70524562 70529019 Mepo3g02534 3 35401022 35405416 PCT